8ET2 | pdb_00008et2

CryoEM structure of the GSDMB pore


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
XIon_transe8et2X1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
WIon_transe8et2W1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
VIon_transe8et2V1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
UIon_transe8et2U1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
TIon_transe8et2T1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
SIon_transe8et2S1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
RIon_transe8et2R1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
QIon_transe8et2Q1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
PIon_transe8et2P1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
OIon_transe8et2O1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
NIon_transe8et2N1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
MIon_transe8et2M1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
LIon_transe8et2L1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
KIon_transe8et2K1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
JIon_transe8et2J1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
IIon_transe8et2I1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
HIon_transe8et2H1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
GIon_transe8et2G1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
FIon_transe8et2F1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
EIon_transe8et2E1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
DIon_transe8et2D1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
CIon_transe8et2C1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
BIon_transe8et2B1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)
AIon_transe8et2A1 A: alpha bundlesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF04598Gasdermin pore forming domain (Gasdermin)Gasdermin pore forming domainThe precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resis ...The precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resistance in melanoma cells [2]. This family also includes the gasdermin protein [3]
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Isoform 1 of Gasdermin-B

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR040460Gasdermin, pore forming domainDomain
A, B, C, D, E
IPR041263Gasdermin, PUB domainDomain
A, B, C, D, E
IPR007677GasderminFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
A, B, C, D, E
OPMTransmembraneBeta-barrel transmembraneGasderminGasdermin

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B, C, D, E
mpstrucTRANSMEMBRANE PROTEINS: BETA-BARRELGasdermin (GSDM) FamilyGasdermin GSDMB pore