CryoEM structure of the GSDMB pore
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| X | Ion_trans | e8et2X1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| W | Ion_trans | e8et2W1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| V | Ion_trans | e8et2V1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| U | Ion_trans | e8et2U1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| T | Ion_trans | e8et2T1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| S | Ion_trans | e8et2S1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| R | Ion_trans | e8et2R1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| Q | Ion_trans | e8et2Q1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| P | Ion_trans | e8et2P1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| O | Ion_trans | e8et2O1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| N | Ion_trans | e8et2N1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| M | Ion_trans | e8et2M1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| L | Ion_trans | e8et2L1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| K | Ion_trans | e8et2K1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| J | Ion_trans | e8et2J1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| I | Ion_trans | e8et2I1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| H | Ion_trans | e8et2H1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| G | Ion_trans | e8et2G1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| F | Ion_trans | e8et2F1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| E | Ion_trans | e8et2E1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| D | Ion_trans | e8et2D1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| C | Ion_trans | e8et2C1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| B | Ion_trans | e8et2B1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
| A | Ion_trans | e8et2A1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ion_trans | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04598 | Gasdermin pore forming domain (Gasdermin) | Gasdermin pore forming domain | The precise function of this protein is unknown. A deletion/insertion mutation is associated with an autosomal dominant non-syndromic hearing impairment form [1]. In addition, this protein has also been found to contribute to acquired etoposide resis ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Beta-barrel transmembrane | Gasdermin | Gasdermin |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Gasdermin (GSDM) Family | Gasdermin GSDMB pore |














