8EN6

Structure of GII.4 norovirus in complex with Nanobody 76

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF08435e8en6A1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF08435ECOD (1.6)
C [auth B]PF08435e8en6B1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF08435ECOD (1.6)
B [auth C]PF07686e8en6C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
DPF07686e8en6D1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth C],
D		Heavy ChainIGHV1 -gii.17 p domainSAbDab (2024-04-26)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth B]		PF00915Calicivirus coat protein (Calici_coat)Calicivirus coat protein- Family
A,
C [auth B]		PF08435Calicivirus coat protein C-terminal (Calici_coat_C)Calicivirus coat protein C-terminal- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
C [auth B]		IPR029053Viral coat protein subunitHomologous Superfamily
A,
C [auth B]		IPR004005Calicivirus coat proteinDomain
A,
C [auth B]		IPR013643Calicivirus coat protein C-terminalDomain
A,
C [auth B]		IPR033703Picornavirus/Calicivirus coat proteinDomain