Annotations: 8EMQ

Mouse apoferritin heavy chain with zinc determined using single-particle cryo-EM with Apollo camera.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ferritin-like	8063904	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	Glyco_hydro_20b	e8emqX1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
W	Glyco_hydro_20b	e8emqW1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
V	Glyco_hydro_20b	e8emqV1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
U	Glyco_hydro_20b	e8emqU1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
T	Glyco_hydro_20b	e8emqT1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
S	Glyco_hydro_20b	e8emqS1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
R	Glyco_hydro_20b	e8emqR1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
Q	Glyco_hydro_20b	e8emqQ1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
P	Glyco_hydro_20b	e8emqP1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
O	Glyco_hydro_20b	e8emqO1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
N	Glyco_hydro_20b	e8emqN1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
M	Glyco_hydro_20b	e8emqM1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
L	Glyco_hydro_20b	e8emqL1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
K	Glyco_hydro_20b	e8emqK1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
J	Glyco_hydro_20b	e8emqJ1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
I	Glyco_hydro_20b	e8emqI1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
H	Glyco_hydro_20b	e8emqH1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
G	Glyco_hydro_20b	e8emqG1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
F	Glyco_hydro_20b	e8emqF1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
E	Glyco_hydro_20b	e8emqE1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
D	Glyco_hydro_20b	e8emqD1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
C	Glyco_hydro_20b	e8emqC1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
B	Glyco_hydro_20b	e8emqB1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)
A	Glyco_hydro_20b	e8emqA1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: Glyco_hydro_20b	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
X	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
W	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
V	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
U	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
T	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
S	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
R	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
Q	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
P	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
O	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
N	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
M	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
L	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
K	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
J	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
I	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
H	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
G	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
F	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
E	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	Ferritin heavy chain, N-terminally processed	cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity identical protein binding protein binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport response to stimulus immune response immune system process negative regulation of ferroptosis regulation of biological process regulation of cellular process negative regulation of programmed cell death biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of cellular process regulation of ferroptosis ferroptosis programmed cell death negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation fibroblast proliferation regulation of fibroblast proliferation negative regulation of fibroblast proliferation	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane cytosol vacuole autophagosome extracellular region autolysosome membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane cytosol vacuole autophagosome extracellular region autolysosome lytic vacuole secondary lysosome lysosome intracellular vesicle membrane-enclosed lumen intracellular organelle lumen cytoplasmic vesicle organelle lumen endocytic vesicle lumen vesicle endocytic vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR001519	Ferritin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X	IPR014034	Ferritin, conserved site	Conserved Site

8EMQ | pdb_00008emq

Mouse apoferritin heavy chain with zinc determined using single-particle cryo-EM with Apollo camera.

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage