8EMA | pdb_00008ema

mouse full length B cell receptor

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth L]C1-sete8emaL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
D [auth L]V-set_3e8emaL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
C [auth R]C1-sete8emaR1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
C [auth R]V-set_3e8emaR2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth R],
D [auth L]		Light ChainIGLV1 Lambda-SAbDab (2025-12-19)
A, B
Heavy ChainIGHV1 --SAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth D]PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
E [auth C]PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prote ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain
C [auth R],
D [auth L]		PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
C [auth R],
D [auth L]		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A, B
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
A, B
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth D]B-cell antigen receptor complex-associated protein beta chain
E [auth C]B-cell antigen receptor complex-associated protein alpha chain
C [auth R],
D [auth L]		Anti-human Langerin 2G3 lambda chain-
A, B
Isoform 2 of Immunoglobulin heavy constant mu

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth D]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
F [auth D]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth D]IPR013106Immunoglobulin V-set domainDomain
F [auth D]IPR003599Immunoglobulin domain subtypeDomain
F [auth D]IPR007110Immunoglobulin-like domainDomain
F [auth D]IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
E [auth C]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth C]IPR013151Immunoglobulin-like beta-sandwich domainDomain
E [auth C]IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth C]IPR003599Immunoglobulin domain subtypeDomain
E [auth C]IPR007110Immunoglobulin-like domainDomain
E [auth C]IPR003110Phosphorylated immunoreceptor signalling ITAMRepeat
E [auth C]IPR017938Riboflavin synthase-like beta-barrelHomologous Superfamily
E [auth C]IPR026017Lumazine-binding domainDomain
E [auth C]IPR001783Lumazine-binding proteinFamily
E [auth C]IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
C [auth R],
D [auth L]		IPR003597Immunoglobulin C1-setDomain
C [auth R],
D [auth L]		IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth R],
D [auth L]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth R],
D [auth L]		IPR013106Immunoglobulin V-set domainDomain
C [auth R],
D [auth L]		IPR003599Immunoglobulin domain subtypeDomain
C [auth R],
D [auth L]		IPR007110Immunoglobulin-like domainDomain
C [auth R],
D [auth L]		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
C [auth R],
D [auth L]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A, B
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, B
IPR003597Immunoglobulin C1-setDomain
A, B
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A, B
IPR050380Immune Recognition and Response ModulatorsFamily
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR007110Immunoglobulin-like domainDomain
A, B
IPR050199Immunoglobulin Heavy VariableFamily
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, B
IPR013106Immunoglobulin V-set domainDomain
A, B
IPR007110Immunoglobulin-like domainDomain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneBitopic proteinsT-cell and B-cell receptor complexesB-cell antigen receptor complex

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM