Lassa virus glycoprotein complex (Josiah) bound to S370.7 Fab
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J [auth c] | Polyketide_cyc2 | e8ejjc1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| I [auth b] | Polyketide_cyc2 | e8ejjb1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| H [auth a] | Polyketide_cyc2 | e8ejja1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| L [auth l] | Polyketide_cyc2 | e8ejjl1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| G [auth L] | Polyketide_cyc2 | e8ejjL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| F [auth J] | e8ejjJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| K [auth h] | Polyketide_cyc2 | e8ejjh1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| E [auth I] | Polyketide_cyc2 | e8ejjI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| D [auth H] | e8ejjH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| C | Polyketide_cyc2 | e8ejjC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| B | Polyketide_cyc2 | e8ejjB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| A | Polyketide_cyc2 | e8ejjA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| L [auth l] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| G [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| F [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| K [auth h] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| E [auth I] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| D [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| F [auth J], G [auth L], L [auth l] | Light Chain | IGLV3 | Lambda | - | SAbDab (2026-03-27) |
| D [auth H], E [auth I], K [auth h] | Heavy Chain | IGHV4 | - | - | SAbDab (2026-03-27) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00798 | Arenavirus glycoprotein (Arena_glycoprot) | Arenavirus glycoprotein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| H [auth a], I [auth b], J [auth c] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
| H [auth a], I [auth b], J [auth c] | IPR001535 | Arenavirus glycoprotein | Family |
| IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily | |
| IPR001535 | Arenavirus glycoprotein | Family |














