Lassa virus glycoprotein complex (Josiah) bound to 12.1F Fab
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A [auth C] | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
| D [auth A] | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Lassa virus GP1 subunit, receptor binding domain-like | 8106407 | 3002852 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L [auth l] | Polyketide_cyc2 | e8ejhl1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| J [auth K] | Polyketide_cyc2 | e8ejhK1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| H [auth L] | e8ejhL1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (develop294) | |
| G [auth H] | e8ejhH1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (develop294) | |
| K [auth h] | Polyketide_cyc2 | e8ejhh1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| I [auth J] | Polyketide_cyc2 | e8ejhJ1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| F [auth a] | Polyketide_cyc2 | e8ejha1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| E [auth b] | Polyketide_cyc2 | e8ejhb1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| C [auth c] | Polyketide_cyc2 | e8ejhc1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| A [auth C] | Polyketide_cyc2 | e8ejhC1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| D [auth A] | Polyketide_cyc2 | e8ejhA1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
| B | Polyketide_cyc2 | e8ejhB1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Polyketide_cyc2 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| L [auth l] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| J [auth K] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| H [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| G [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| K [auth h] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| I [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| H [auth L], J [auth K], L [auth l] | Light Chain | IGKV3 | Kappa | glycoprotein g2 | SAbDab (2026-03-20) |
| G [auth H], I [auth J], K [auth h] | Heavy Chain | IGHV4 | - | glycoprotein g2 | SAbDab (2026-03-20) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth c], E [auth b], F [auth a] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
| C [auth c], E [auth b], F [auth a] | IPR001535 | Arenavirus glycoprotein | Family |
| A [auth C], B, D [auth A] | IPR043015 | Arenavirus glycoprotein, zinc binding domain | Homologous Superfamily |
| A [auth C], B, D [auth A] | IPR001535 | Arenavirus glycoprotein | Family |














