8EJ4

Cryo-EM structure of the active NLRP3 inflammasome disk


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyProtein kinase-like (PK-like)8062565 3000066 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF13516e8ej4A1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
APF17779e8ej4A5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
AF_UNCLASSIFIEDe8ej4A4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
APF17776e8ej4A3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
APF05729,PF14484e8ej4A2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
BPF13516e8ej4B1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
BPF17779e8ej4B5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
BF_UNCLASSIFIEDe8ej4B4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
BPF17776e8ej4B3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
BPF05729,PF14484e8ej4B2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
CPF13516e8ej4C1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
CPF17779e8ej4C5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
CF_UNCLASSIFIEDe8ej4C4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
CPF17776e8ej4C3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
CPF05729,PF14484e8ej4C2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
DPF13516e8ej4D1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
DPF17779e8ej4D5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
DF_UNCLASSIFIEDe8ej4D4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
DPF17776e8ej4D3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
DPF05729,PF14484e8ej4D2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
EPF13516e8ej4E1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
EPF17779e8ej4E5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
EF_UNCLASSIFIEDe8ej4E4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
EPF17776e8ej4E3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
EPF05729,PF14484e8ej4E2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
FPF13516e8ej4F1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
FPF17779e8ej4F5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
FF_UNCLASSIFIEDe8ej4F4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
FPF17776e8ej4F3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
FPF05729,PF14484e8ej4F2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
GPF13516e8ej4G1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
GPF17779e8ej4G5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
GF_UNCLASSIFIEDe8ej4G4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
GPF17776e8ej4G3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
GPF05729,PF14484e8ej4G2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
HPF13516e8ej4H1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
HPF17779e8ej4H5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
HF_UNCLASSIFIEDe8ej4H4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
HPF17776e8ej4H3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
HPF05729,PF14484e8ej4H2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
IPF13516e8ej4I1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
IPF17779e8ej4I5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
IF_UNCLASSIFIEDe8ej4I4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
IPF17776e8ej4I3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
IPF05729,PF14484e8ej4I2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
JPF13516e8ej4J1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: PF13516ECOD (1.6)
JPF17779e8ej4J5 A: alpha arraysX: HTHH: HTHT: wingedF: PF17779ECOD (1.6)
JF_UNCLASSIFIEDe8ej4J4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: F_UNCLASSIFIEDECOD (1.6)
JPF17776e8ej4J3 A: alpha superhelicesX: NLRC4 helical domain HD2 (From Topology)H: NLRC4 helical domain HD2 (From Topology)T: NLRC4 helical domain HD2F: PF17776ECOD (1.6)
JPF05729,PF14484e8ej4J2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF05729,PF14484ECOD (1.6)
KPF00069e8ej4K1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
LPF00069e8ej4L1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
MPF00069e8ej4M1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
NPF00069e8ej4N1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
OPF00069e8ej4O1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
PPF00069e8ej4P1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
QPF00069e8ej4Q1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
RPF00069e8ej4R1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
SPF00069e8ej4S1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)
TPF00069e8ej4T1 A: a+b complex topologyX: Protein kinase/SAICAR synthase/ATP-grasp (From Homology)H: Protein kinase/SAICAR synthase/ATP-graspT: Protein kinaseF: PF00069ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF05729NACHT domain (NACHT)NACHT domainThis NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation [1]. This family is closely related to Pfam:PF00931.Domain
A, B, C, D, E
PF13516Leucine Rich repeat (LRR_6)Leucine Rich repeat- Repeat
A, B, C, D, E
PF14484Fish-specific NACHT associated domain (FISNA)Fish-specific NACHT associated domain- Family
A, B, C, D, E
PF17776NLRC4 helical domain HD2 (NLRC4_HD2)NLRC4 helical domain HD2This entry represents a helical domain found in the NLRC4 protein [2] and NOD2 protein [1].Domain
A, B, C, D, E
PF17779NOD2 winged helix domain (NOD2_WH)NOD2 winged helix domainThis winged helix domain is found in the NOD2 protein [1]. Its molecular function is not known.Domain
K, L, M, N, O
PF00069Protein kinase domain (Pkinase)Protein kinase domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
NACHT, LRR and PYD domains-containing protein 3
K, L, M, N, O
Serine/threonine-protein kinase Nek7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR001611Leucine-rich repeatRepeat
A, B, C, D, E
IPR041075NOD2, winged helix domainDomain
A, B, C, D, E
IPR004020DAPIN domainDomain
A, B, C, D, E
IPR029495NACHT-associated domainDomain
A, B, C, D, E
IPR007111NACHT nucleoside triphosphataseDomain
A, B, C, D, E
IPR011029Death-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR041267NACHT, LRR and PYD domains-containing protein, helical domain HD2Domain
A, B, C, D, E
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
K, L, M, N, O
IPR017441Protein kinase, ATP binding siteBinding Site
K, L, M, N, O
IPR000719Protein kinase domainDomain
K, L, M, N, O
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
K, L, M, N, O
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
K, L, M, N, O
IPR008271Serine/threonine-protein kinase, active siteActive Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B, C, D, E
PharosQ96P20
K, L, M, N, O
PharosQ8TDX7