8E73

Vigna radiata supercomplex I+III2 (full bridge)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CA [auth A2]SCOP2B SuperfamilyThioredoxin-like8096544 3000031 SCOP2B (2022-06-29)
FB [auth S4]SCOP2B SuperfamilyNADH-ubiquinone oxidoreductase-like8096550 3002258 SCOP2B (2022-06-29)
IB [auth S7]SCOP2B SuperfamilyNqo6/HydA N-terminal domain-like8096548 3002291 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth A1]PF15879e8e73A11 A: extended segmentsX: Mitochondrial complex I, MWFE subunit (From Topology)H: Mitochondrial complex I, MWFE subunit (From Topology)T: Mitochondrial complex I, MWFE subunitF: PF15879ECOD (1.6)
FA [auth A6]F_UNCLASSIFIEDe8e73A61 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: F_UNCLASSIFIEDECOD (1.6)
IA [auth A9]PF01370e8e73A91 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: PF01370ECOD (1.6)
OA [auth B2]F_UNCLASSIFIEDe8e73B21 A: extended segmentsX: Mitochondrial complex I, AGGG subunit (From Topology)H: Mitochondrial complex I, AGGG subunit (From Topology)T: Mitochondrial complex I, AGGG subunitF: F_UNCLASSIFIEDECOD (1.6)
EB [auth S3]PF00329e8e73S31 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: PF00329ECOD (1.6)
OB [auth V2]PF01257e8e73V21 A: alpha bundlesX: NQO2 helical bundle domain (From Topology)H: NQO2 helical bundle domain (From Topology)T: NQO2 helical bundle domainF: PF01257ECOD (1.6)
OB [auth V2]PF01257e8e73V22 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF01257ECOD (1.6)
U [auth 1M]PF00146e8e731M1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: PF00146ECOD (1.6)
V [auth 2M]PF00361e8e732M1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361ECOD (1.6)
X [auth 4M]PF00361e8e734M1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361ECOD (1.6)
Y [auth 4L]PF00420e8e734L1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: PF00420ECOD (1.6)
CA [auth A2]PF05047e8e73A21 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
HA [auth A8]F_UNCLASSIFIEDe8e73A81 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: F_UNCLASSIFIEDECOD (1.6)
HA [auth A8]PF06747e8e73A82 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
KA [auth AL]PF05071e8e73AL1 A: a+b three layersX: Mitochondrial complex I, B17.2 subunit (From Topology)H: Mitochondrial complex I, B17.2 subunit (From Topology)T: Mitochondrial complex I, B17.2 subunitF: PF05071ECOD (1.6)
LA [auth AM]PF06212e8e73AM1 A: extended segmentsX: Mitochondrial complex I, B16.6 subunit (From Topology)H: Mitochondrial complex I, B16.6 subunit (From Topology)T: Mitochondrial complex I, B16.6 subunitF: PF06212ECOD (1.6)
CPF00032e8e73C1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
CPF00033e8e73C2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
M [auth O]PF00032e8e73O1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF00032ECOD (1.6)
M [auth O]PF00033e8e73O2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: PF00033ECOD (1.6)
MA [auth AC]PF00550e8e73AC1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
NA [auth AB]PF00550e8e73AB1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
DPF02167e8e73D2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
DF_UNCLASSIFIEDe8e73D1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
N [auth P]PF02167e8e73P2 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: PF02167ECOD (1.6)
N [auth P]F_UNCLASSIFIEDe8e73P1 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: F_UNCLASSIFIEDECOD (1.6)
WA [auth FD]F_UNCLASSIFIEDe8e73FD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: F_UNCLASSIFIEDECOD (1.6)
BB [auth L2]F_UNCLASSIFIEDe8e73L21 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: F_UNCLASSIFIEDECOD (1.6)
CB [auth S1]PF22117e8e73S12 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF22117ECOD (1.6)
CB [auth S1]PF13510e8e73S16 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF13510ECOD (1.6)
CB [auth S1]PF22151e8e73S15 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: PF22151ECOD (1.6)
CB [auth S1]PF00384e8e73S13 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384ECOD (1.6)
CB [auth S1]PF00384,PF09326e8e73S14 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384,PF09326ECOD (1.6)
CB [auth S1]PF10588e8e73S11 A: extended segmentsX: iron-sulfur center-binding helical hairpin (From Topology)H: iron-sulfur center-binding helical hairpin (From Topology)T: iron-sulfur center-binding helical hairpinF: PF10588ECOD (1.6)
DB [auth S2]PF00346e8e73S21 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: PF00346ECOD (1.6)
DB [auth S2]PF00346e8e73S23 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: PF00346ECOD (1.6)
FB [auth S4]PF04800e8e73S41 A: a+b two layersX: Putative oxidoreductase (From Topology)H: Putative oxidoreductase (From Topology)T: Putative oxidoreductaseF: PF04800ECOD (1.6)
EPF02921e8e73E1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
O [auth Q]PF02921e8e73Q1 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: PF02921ECOD (1.6)
GB [auth S5]PF10200e8e73S51 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: CHCH domain (From Topology)T: CHCH domainF: PF10200ECOD (1.6)
HB [auth S6]PF10276e8e73S61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF10276ECOD (1.6)
IB [auth S7]PF01058e8e73S71 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF01058ECOD (1.6)
JB [auth S8]PF00037e8e73S81 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)
NB [auth V1]PF10589e8e73V12 A: alpha bundlesX: Bromodomain-likeH: Nqo1C-terminal domain-like (From Topology)T: Nqo1C-terminal domain-likeF: PF10589ECOD (1.6)
NB [auth V1]PF22461e8e73V13 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Nqo1 middle domain-likeF: PF22461ECOD (1.6)
NB [auth V1]PF01512e8e73V11 A: a/b three-layered sandwichesX: Nqo1 FMN-binding domain-like (From Topology)H: Nqo1 FMN-binding domain-like (From Topology)T: Nqo1 FMN-binding domain-likeF: PF01512ECOD (1.6)
FPF02271e8e73F1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
P [auth R]PF02271e8e73R1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02271ECOD (1.6)
GPF10890e8e73G1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF10890ECOD (1.6)
Q [auth S]PF10890e8e73S1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF10890ECOD (1.6)
HPF02320e8e73H1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
R [auth T]PF02320e8e73T1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF02320ECOD (1.6)
I [auth J]PF05365e8e73J1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)
S [auth V]PF05365e8e73V1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: PF05365ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
L [auth N]PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
L [auth N]PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
BA [auth A1]PF15879NADH-ubiquinone oxidoreductase MWFE subunit (MWFE)NADH-ubiquinone oxidoreductase MWFE subunit- Family
IA [auth A9]PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family
JA [auth AK]PF02466Tim17/Tim22/Tim23/Pmp24 family (Tim17)Tim17/Tim22/Tim23/Pmp24 family- Family
PA [auth B3]PF08122NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12)NADH-ubiquinone oxidoreductase B12 subunit family- Family
OB [auth V2]PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
A,
K [auth M]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A,
K [auth M]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
W [auth 3M]PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
CA [auth A2]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
EA [auth A5]PF04716ETC complex I subunit conserved region (ETC_C1_NDUFA5)ETC complex I subunit conserved region- Family
HA [auth A8]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
KA [auth AL]PF05071NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12)NADH ubiquinone oxidoreductase subunit NDUFA12- Family
LA [auth AM]PF06212GRIM-19 protein (GRIM-19)GRIM-19 protein- Family
MA [auth AC]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
NA [auth AB]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
RA [auth B7]PF05676NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7)NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)- Family
TA [auth B9]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
D,
N [auth P]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
ZA [auth G1]PF14602Hexapeptide repeat of succinyl-transferase (Hexapep_2)Hexapeptide repeat of succinyl-transferase- Repeat
AB [auth G2]PF14602Hexapeptide repeat of succinyl-transferase (Hexapep_2)Hexapeptide repeat of succinyl-transferase- Repeat
CB [auth S1]PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductase- Family
CB [auth S1]PF09326NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)NADH-ubiquinone oxidoreductase subunit G, C-terminal- Family
CB [auth S1]PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
CB [auth S1]PF10588NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)NADH-ubiquinone oxidoreductase-G iron-sulfur binding region- Domain
FB [auth S4]PF04800NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)NADH dehydrogenase ubiquinone Fe-S protein 4- Family
E,
O [auth Q]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
HB [auth S6]PF10276Zinc-finger domain (zf-CHCC)Zinc-finger domainThis is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C.Domain
IB [auth S7]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
JB [auth S8]PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
KB [auth P1]PF17250NADH-ubiquinone oxidoreductase 11 kDa subunit (NDUFB11)NADH-ubiquinone oxidoreductase 11 kDa subunit- Family
PB [auth X1]PF10785NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit (NADH-u_ox-rdase)NADH-ubiquinone oxidoreductase complex I, 21 kDa subunitThis family is the N-terminal domain of NADH-ubiquinone oxidoreductase 21 kDa subunits from fungi, lower metazoa and plants.Domain
F,
P [auth R]
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
G,
Q [auth S]
PF10890Cytochrome b-c1 complex subunit 8 (Cyt_b-c1_8)Cytochrome b-c1 complex subunit 8- Family
H,
R [auth T]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
I [auth J],
S [auth V]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth N]MPP-alpha (protomer 2)
BA [auth A1]NDUA1- -
FA [auth A6]NDUA6-
IA [auth A9]NDUA9
JA [auth AK]NDUA11
OA [auth B2]NDUB2- -
PA [auth B3]NDUB3-
SA [auth B8]NDUB8- -
EB [auth S3]NDUS3 -
OB [auth V2]NDUV2
A,
K [auth M]
MPP-beta
J [auth K],
T [auth W]
QCR10 (UCRY)---
U [auth 1M]Nad1
V [auth 2M]Nad2
W [auth 3M]Nad3 -
X [auth 4M]Nad4
Y [auth 4L]Nad4L
Z [auth 5M]Nad5
AA [auth 6M]Nad6 -
MPP-alpha (protomer 1)
CA [auth A2]NDUA2- -
DA [auth A3]NDUA3- -
EA [auth A5]NDUA5-
GA [auth A7]NDUA7- - -
HA [auth A8]NDUA8-
KA [auth AL]NDUA12-
LA [auth AM]NDUA13- -
C,
M [auth O]
COB (cyt b)
MA [auth AC]NDUAB1-beta -
NA [auth AB]NDUAB1-alpha -
QA [auth B4]NDUB4- -
RA [auth B7]NDUB7- -
TA [auth B9]NDUB9-
UA [auth BJ]NDUB10- -
VA [auth BK]NDUB11- - -
D,
N [auth P]
CYC1 (cyt c1)
WA [auth FD]NDUFX
XA [auth C2]NDUC2- - -
YA [auth P2]NDUP2- -
ZA [auth G1]NDUCA1- -
AB [auth G2]NDUCA2- -
BB [auth L2]NDUCAL2- -
CB [auth S1]NDUS1
DB [auth S2]NDUS2
FB [auth S4]NDUS4-
E,
O [auth Q]
UCR1 (Rieske iron-sulfur protein subunit)
GB [auth S5]NDUS5 -
HB [auth S6]NDUS6-
IB [auth S7]NDUS7
JB [auth S8]NDUS8
KB [auth P1]NDUP1- -
LB [auth P4]NDUP4- -
MB [auth C1]NDUB6- - -
NB [auth V1]NDUV1
PB [auth X1]NDUX1- -
F,
P [auth R]
QCR7-
G,
Q [auth S]
QCR8-
H,
R [auth T]
QCR6-
I [auth J],
S [auth V]
QCR9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
L [auth N]IPR007863Peptidase M16, C-terminalDomain
L [auth N]IPR011765Peptidase M16, N-terminalDomain
L [auth N]IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
L [auth N]IPR001431Peptidase M16, zinc-binding siteBinding Site
BA [auth A1]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
FA [auth A6]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
FA [auth A6]IPR045299NDUFA6, LYR domainDomain
IA [auth A9]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
IA [auth A9]IPR001509NAD-dependent epimerase/dehydrataseDomain
JA [auth AK]IPR039175Mitochondrial import inner membrane translocase subunit TIM22Family
OA [auth B2]IPR044980NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungiFamily
PA [auth B3]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
SA [auth B8]IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialFamily
EB [auth S3]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
EB [auth S3]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
EB [auth S3]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
EB [auth S3]IPR010218NADH dehydrogenase, subunit CFamily
OB [auth V2]IPR042128NuoE domainDomain
OB [auth V2]IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
OB [auth V2]IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
OB [auth V2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
A,
K [auth M]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth M]
IPR011765Peptidase M16, N-terminalDomain
A,
K [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth M]
IPR001431Peptidase M16, zinc-binding siteBinding Site
U [auth 1M]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
U [auth 1M]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
V [auth 2M]IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
V [auth 2M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
W [auth 3M]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
W [auth 3M]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
X [auth 4M]IPR003918NADH:ubiquinone oxidoreductaseFamily
X [auth 4M]IPR010227NADH-quinone oxidoreductase, chain M/4Family
X [auth 4M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
Y [auth 4L]IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
Y [auth 4L]IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
Z [auth 5M]IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
Z [auth 5M]IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
Z [auth 5M]IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
Z [auth 5M]IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
AA [auth 6M]IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
AA [auth 6M]IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
IPR007863Peptidase M16, C-terminalDomain
IPR011765Peptidase M16, N-terminalDomain
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
IPR001431Peptidase M16, zinc-binding siteBinding Site
CA [auth A2]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
CA [auth A2]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
CA [auth A2]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
EA [auth A5]IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5Family
HA [auth A8]IPR010625CHCHDomain
HA [auth A8]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
KA [auth AL]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
LA [auth AM]IPR009346GRIM-19Family
C,
M [auth O]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth O]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth O]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth O]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth O]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth O]
IPR030689Cytochrome bFamily
C,
M [auth O]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth O]
IPR005797Cytochrome b/b6, N-terminal domainDomain
MA [auth AC]IPR009081Phosphopantetheine binding ACP domainDomain
MA [auth AC]IPR036736ACP-like superfamilyHomologous Superfamily
MA [auth AC]IPR003231Acyl carrier proteinFamily
NA [auth AB]IPR006162Phosphopantetheine attachment sitePTM
NA [auth AB]IPR009081Phosphopantetheine binding ACP domainDomain
NA [auth AB]IPR036736ACP-like superfamilyHomologous Superfamily
NA [auth AB]IPR003231Acyl carrier proteinFamily
RA [auth B7]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
TA [auth B9]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
TA [auth B9]IPR008011Complex 1 LYR protein domainDomain
TA [auth B9]IPR045292NDUFB9, LYR domainDomain
UA [auth BJ]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
D,
N [auth P]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth P]
IPR002326Cytochrome c1Family
D,
N [auth P]
IPR009056Cytochrome c-like domainDomain
D,
N [auth P]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
WA [auth FD]IPR001055Adrenodoxin-likeFamily
WA [auth FD]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
WA [auth FD]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
YA [auth P2]IPR045284At2g27730-likeFamily
ZA [auth G1]IPR047324Gamma carbonic anhydrase-likeFamily
ZA [auth G1]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
ZA [auth G1]IPR001451Hexapeptide repeatRepeat
AB [auth G2]IPR047324Gamma carbonic anhydrase-likeFamily
AB [auth G2]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
AB [auth G2]IPR001451Hexapeptide repeatRepeat
BB [auth L2]IPR047324Gamma carbonic anhydrase-likeFamily
BB [auth L2]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
CB [auth S1]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
CB [auth S1]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
CB [auth S1]IPR006656Molybdopterin oxidoreductaseDomain
CB [auth S1]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
CB [auth S1]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
CB [auth S1]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
CB [auth S1]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
CB [auth S1]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
DB [auth S2]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
DB [auth S2]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
DB [auth S2]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
DB [auth S2]IPR001135NADH-quinone oxidoreductase, subunit DDomain
FB [auth S4]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
FB [auth S4]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
E,
O [auth Q]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth Q]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth Q]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth Q]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth Q]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
E,
O [auth Q]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
GB [auth S5]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
GB [auth S5]IPR000504RNA recognition motif domainDomain
GB [auth S5]IPR035979RNA-binding domain superfamilyHomologous Superfamily
HB [auth S6]IPR019401Zinc finger, CHCC-typeDomain
IB [auth S7]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
IB [auth S7]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
JB [auth S8]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
JB [auth S8]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
JB [auth S8]IPR010226NADH-quinone oxidoreductase, chain IFamily
KB [auth P1]IPR035204NADH-ubiquinone oxidoreductase 11kDa subunitFamily
NB [auth V1]IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
NB [auth V1]IPR019554Soluble ligand binding domainDomain
NB [auth V1]IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
NB [auth V1]IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
NB [auth V1]IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
NB [auth V1]IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
NB [auth V1]IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
PB [auth X1]IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalDomain
F,
P [auth R]
IPR003197Cytochrome b-c1 complex subunit 7Family
F,
P [auth R]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G,
Q [auth S]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
G,
Q [auth S]
IPR020101Cytochrome b-c1 complex subunit 8, plantsFamily
H,
R [auth T]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
R [auth T]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
R [auth T]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
I [auth J],
S [auth V]
IPR008027Cytochrome b-c1 complex subunit 9Family
I [auth J],
S [auth V]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily