8DVE
RyR1 in presence of IpCa-T26E phosphomimetic and activating ligands
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth E] | SCOP2B Superfamily | Rotamase-like | 8034864 | 3000622 | SCOP2B (2022-06-29) |
E [auth B] | SCOP2B Superfamily | Rotamase-like | 8034864 | 3000622 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Rotamase-like | 8034864 | 3000622 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Rotamase-like | 8034864 | 3000622 | SCOP2B (2022-06-29) |
C [auth F] | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
F [auth C] | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth E] | PF00254 | e8dveE1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF00254 | ECOD (1.6) |
E [auth B] | PF00254 | e8dveB1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF00254 | ECOD (1.6) |
H | PF00254 | e8dveH1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF00254 | ECOD (1.6) |
K | PF00254 | e8dveK1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: PF00254 | ECOD (1.6) |
C [auth F] | PF00036 | e8dveF2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036 | ECOD (1.6) |
C [auth F] | PF13499 | e8dveF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
F [auth C] | PF00036 | e8dveC2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036 | ECOD (1.6) |
F [auth C] | PF13499 | e8dveC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
I | PF00036 | e8dveI1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036 | ECOD (1.6) |
I | PF13499 | e8dveI2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
L | PF00036 | e8dveL2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF00036 | ECOD (1.6) |
L | PF13499 | e8dveL1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: PF13499 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], D [auth A], G, J | PF00622 | SPRY domain (SPRY) | SPRY domain | - | Family |
A [auth D], D [auth A], G, J | PF08454 | RyR and IP3R Homology associated (RIH_assoc) | RyR and IP3R Homology associated | - | Repeat |
A [auth D], D [auth A], G, J | PF02815 | MIR domain (MIR) | MIR domain | The MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1]. | Domain |
A [auth D], D [auth A], G, J | PF08709 | Inositol 1,4,5-trisphosphate/ryanodine receptor (Ins145_P3_rec) | Inositol 1,4,5-trisphosphate/ryanodine receptor | This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-ga ... | Domain |
A [auth D], D [auth A], G, J | PF21119 | Ryanodine receptor junctional solenoid repeat (RYDR_Jsol) | Ryanodine receptor junctional solenoid repeat | This entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1]. | Domain |
A [auth D], D [auth A], G, J | PF01365 | RIH domain (RYDR_ITPR) | RIH domain | - | Repeat |
A [auth D], D [auth A], G, J | PF02026 | RyR domain (RyR) | RyR domain | - | Family |
B [auth E], E [auth B], H, K | PF00254 | FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) | FKBP-type peptidyl-prolyl cis-trans isomerase | - | Domain |
C [auth F], F [auth C], I, L | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Ryanodine receptor |