8DUJ

Global map in C1 of RyR1 particles in complex with ImperaCalcin

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth M]SCOP2B Superfamilyomega toxin-like8044554 3000255 SCOP2B (2022-06-29)
C [auth H]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
L [auth K]SCOP2B SuperfamilyRotamase-like8034864 3000622 SCOP2B (2022-06-29)
D [auth I]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
M [auth L]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth M]PF08099e8dujM1 A: few secondary structure elementsX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: PF08099ECOD (1.6)
C [auth H]PF00254e8dujH1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
F [auth B]PF00254e8dujB1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
I [auth E]PF00254e8dujE1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
L [auth K]PF00254e8dujK1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
D [auth I]PF00036e8dujI1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
D [auth I]PF13499e8dujI2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
G [auth C]PF00036e8dujC2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
G [auth C]PF13499e8dujC1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
J [auth F]PF00036e8dujF2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
J [auth F]PF13499e8dujF1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
M [auth L]PF00036e8dujL2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
M [auth L]PF13499e8dujL1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth M]PF08099Scorpion calcine family (Toxin_27)Scorpion calcine family- Family
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF00622SPRY domain (SPRY)SPRY domain- Family
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF08454RyR and IP3R Homology associated (RIH_assoc)RyR and IP3R Homology associated- Repeat
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1].Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF08709Inositol 1,4,5-trisphosphate/ryanodine receptor (Ins145_P3_rec)Inositol 1,4,5-trisphosphate/ryanodine receptorThis domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-ga ...This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum discriminate between different types of neuronal activity [1].
Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeatThis entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1].Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
B [auth G],
E [auth A],
H [auth D],
K [auth J]		PF02026RyR domain (RyR)RyR domain- Family
C [auth H],
F [auth B],
I [auth E],
L [auth K]		PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomerase- Domain
D [auth I],
G [auth C],
J [auth F],
M [auth L]		PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pair- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth M]Imperacalcin -
B [auth G],
E [auth A],
H [auth D],
K [auth J]		Ryanodine receptor 1
C [auth H],
F [auth B],
I [auth E],
L [auth K]		Peptidyl-prolyl cis-trans isomerase FKBP1B
D [auth I],
G [auth C],
J [auth F],
M [auth L]		Calmodulin-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth M]IPR012632Scorpion calcineFamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR036300Mir domain superfamilyHomologous Superfamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR000699RIH domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR013662RyR/IP3R Homology associated domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR016093MIR motifDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR003877SPRY domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR001870B30.2/SPRY domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR009460Ryanodine Receptor TM 4-6Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR015925Ryanodine/Inositol 1,4,5-trisphosphate receptorFamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR048581Ryanodine receptor, junctional solenoid domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR035910RyR/IP3 receptor binding core, RIH domain superfamilyHomologous Superfamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR003032Ryanodine receptor RyrDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR035761Ryanodine receptor, SPRY domain 1Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR035764Ryanodine receptor, SPRY domain 2Domain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR013333Ryanodine receptorFamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR043136B30.2/SPRY domain superfamilyHomologous Superfamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR011992EF-hand domain pairHomologous Superfamily
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR005821Ion transport domainDomain
B [auth G],
E [auth A],
H [auth D],
K [auth J]		IPR035762Ryanodine receptor, SPRY domain 3Domain
C [auth H],
F [auth B],
I [auth E],
L [auth K]		IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyHomologous Superfamily
C [auth H],
F [auth B],
I [auth E],
L [auth K]		IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainDomain
D [auth I],
G [auth C],
J [auth F],
M [auth L]		IPR002048EF-hand domainDomain
D [auth I],
G [auth C],
J [auth F],
M [auth L]		IPR018247EF-Hand 1, calcium-binding siteBinding Site
D [auth I],
G [auth C],
J [auth F],
M [auth L]		IPR011992EF-hand domain pairHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth H],
F [auth B],
I [auth E],
L [auth K]		Pharos:  P68106
D [auth I],
G [auth C],
J [auth F],
M [auth L]		Pharos:  P0DP23