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 8DQI | pdb_00008dqi

Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus engineered for acridone amino acid (RS1) bound to ATP and acridone after 2- weeks of crystal growth

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth A]Glyco_transf_41e8dqiA1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Glyco_transf_41ECOD (v295.2)
A [auth D]Glyco_transf_41e8dqiD1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Glyco_transf_41ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth A]3.30.930.10 Alpha Beta 2-Layer Sandwich BirA Bifunctional Protein domain 2CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth D],
B [auth A]		AA_TRNA_LIGASE_II domain-containing protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth D],
B [auth A]		IPR006195Aminoacyl-tRNA synthetase, class IIDomain
A [auth D],
B [auth A]		IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Homologous Superfamily
A [auth D],
B [auth A]		IPR041616Phenylalanyl tRNA synthetase beta chain, core domainDomain
A [auth D],
B [auth A]		IPR023877Pyrrolysyl-tRNA ligase, C-terminalDomain