8DQ0
Quorum-sensing receptor RhlR bound to PqsE
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8036183 | 3001057 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8036183 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF00196 | e8dq0C2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF00196 | ECOD (1.6) |
A [auth C] | PF03472 | e8dq0C1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF03472 | ECOD (1.6) |
B [auth D] | PF00196 | e8dq0D1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: PF00196 | ECOD (1.6) |
B [auth D] | PF03472 | e8dq0D2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PF03472 | ECOD (1.6) |
C [auth A] | PF00753 | e8dq0A1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: PF00753 | ECOD (1.6) |
D [auth B] | PF00753 | e8dq0B1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: PF00753 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth D] | PF03472 | Autoinducer binding domain (Autoind_bind) | Autoinducer binding domain | This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ... | Domain |
A [auth C], B [auth D] | PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | - | Domain |
C [auth A], D [auth B] | PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth D] | IPR000792 | Transcription regulator LuxR, C-terminal | Domain |
A [auth C], B [auth D] | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth D] | IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily |
A [auth C], B [auth D] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A [auth C], B [auth D] | IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | Domain |
C [auth A], D [auth B] | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily |
C [auth A], D [auth B] | IPR001279 | Metallo-beta-lactamase | Domain |