8DP0 | pdb_00008dp0

Structure of p110 gamma bound to the Ras inhibitory nanobody NB7


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyProtein kinase-like (PK-like) 8036675 3000066 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyC2 domain (calcium/lipid-binding domain, calb) 8040718 3000965 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyARM repeat-like 8038599 3000116 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyUbiquitin-like 8034490 3000157 SCOP2B (2022-06-29)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Heavy ChainIGHV1 -phosphatidylinositol 4,5-bisphosphate 3-kinase catalyticsubunit gamma isoform SAbDab (2025-11-28)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00613Phosphoinositide 3-kinase family, accessory domain (PIK domain) (PI3Ka)Phosphoinositide 3-kinase family, accessory domain (PIK domain)- Repeat
PF00792Phosphoinositide 3-kinase C2 (PI3K_C2)Phosphoinositide 3-kinase C2Phosphoinositide 3-kinase region postulated to contain a C2 domain. Outlier of Pfam:PF00168 family. Domain
PF00794PI3-kinase family, ras-binding domain (PI3K_rbd)PI3-kinase family, ras-binding domainCertain members of the PI3K family possess Ras-binding domains in their N-termini. These regions show some similarity (although not highly significant similarity) to Ras-binding Pfam:PF00788 domains (unpublished observation). Domain
PF00454Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase)Phosphatidylinositol 3- and 4-kinase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Nanobody NB7---
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform