8DCM | pdb_00008dcm

Crystal structure of Clostridioides difficile binary toxin proCDTb lacking D4 in complex with BINTOXB/22 Fab


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CTRPM2e8dcmC01 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: TRPM2ECOD (v294.1)
BIon_transe8dcmB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (v294.1)
AIon_transe8dcmA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ion_transECOD (v294.1)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Light ChainIGKV6 Kappaadp-ribosylating binary toxin binding subunit cdtbSAbDab (2026-03-27)
Heavy ChainIGHV9 -adp-ribosylating binary toxin binding subunit cdtbSAbDab (2026-03-27)