8D4G
gamma-Arf1 mediated dimeric assembly of AP-1, Arf1, Nef complex within lattice on MHC-I lipopeptide incorporated wide(r) membrane tubes
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | ARM repeat-like | 8082787 | 3000116 | SCOP2B (2022-06-29) |
K [auth A] | SCOP2B Superfamily | ARM repeat-like | 8082787 | 3000116 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
D [auth H] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
J [auth Z] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
L [auth D] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
N [auth F] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
T [auth Q] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
C [auth G] | SCOP2B Superfamily | ARM repeat-like | 8078176 | 3000116 | SCOP2B (2022-06-29) |
M [auth E] | SCOP2B Superfamily | ARM repeat-like | 8078176 | 3000116 | SCOP2B (2022-06-29) |
F [auth M] | SCOP2B Superfamily | mu adaptin domain-like | 8083652 | 3000810 | SCOP2B (2022-06-29) |
P [auth J] | SCOP2B Superfamily | mu adaptin domain-like | 8083652 | 3000810 | SCOP2B (2022-06-29) |
H [auth S] | SCOP2B Superfamily | SNARE-like | 8082711 | 3001113 | SCOP2B (2022-06-29) |
R [auth O] | SCOP2B Superfamily | SNARE-like | 8082711 | 3001113 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF01602 | e8d4gB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF01602 | ECOD (1.6) |
K [auth A] | PF01602 | e8d4gA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF01602 | ECOD (1.6) |
B [auth C] | PF00025 | e8d4gC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
D [auth H] | PF00025 | e8d4gH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
J [auth Z] | PF00025 | e8d4gZ1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
L [auth D] | PF00025 | e8d4gD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
N [auth F] | PF00025 | e8d4gF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
T [auth Q] | PF00025 | e8d4gQ1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00025 | ECOD (1.6) |
C [auth G] | PF01602 | e8d4gG1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF01602 | ECOD (1.6) |
M [auth E] | PF01602 | e8d4gE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF01602 | ECOD (1.6) |
G [auth N] | PF00469 | e8d4gN1 | A: a+b three layers | X: Regulatory factor Nef (From Topology) | H: Regulatory factor Nef (From Topology) | T: Regulatory factor Nef | F: PF00469 | ECOD (1.6) |
Q [auth K] | PF00469 | e8d4gK1 | A: a+b three layers | X: Regulatory factor Nef (From Topology) | H: Regulatory factor Nef (From Topology) | T: Regulatory factor Nef | F: PF00469 | ECOD (1.6) |
F [auth M] | PF00928 | e8d4gM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00928 | ECOD (1.6) |
F [auth M] | PF01217 | e8d4gM2 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF01217 | ECOD (1.6) |
P [auth J] | PF00928 | e8d4gJ3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00928 | ECOD (1.6) |
P [auth J] | PF01217 | e8d4gJ1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF01217 | ECOD (1.6) |
H [auth S] | PF01217 | e8d4gS1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF01217 | ECOD (1.6) |
R [auth O] | PF01217 | e8d4gO1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: PF01217 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], K [auth A] | PF01602 | Adaptin N terminal region (Adaptin_N) | Adaptin N terminal region | - | Repeat |
PF00025 | ADP-ribosylation factor family (Arf) | ADP-ribosylation factor family | Pfam combines a number of different Prosite families together | Domain | |
C [auth G], M [auth E] | PF01602 | Adaptin N terminal region (Adaptin_N) | Adaptin N terminal region | - | Repeat |
E [auth L], G [auth N], O [auth I], Q [auth K] | PF00469 | Negative factor, (F-Protein) or Nef (F-protein) | Negative factor, (F-Protein) or Nef | - | Family |
F [auth M], P [auth J] | PF00928 | Adaptor complexes medium subunit family (Adap_comp_sub) | Adaptor complexes medium subunit family | - | Family |
H [auth S], R [auth O] | PF01217 | Clathrin adaptor complex small chain (Clat_adaptor_s) | Clathrin adaptor complex small chain | - | Domain |
I [auth Y], S [auth P] | PF06623 | MHC_I C-terminus (MHC_I_C) | MHC_I C-terminus | - | Family |