Annotations: 8CVI

Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
EA [auth M]	Peptidase_S29	e8cviM1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
Q [auth R]	Peptidase_S29	e8cviR1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
T [auth S]	Peptidase_S29	e8cviS1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
Z [auth U]	Peptidase_S29	e8cviU1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
Y [auth K]	Peptidase_S29	e8cviK1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
X [auth d]	Peptidase_S29	e8cvid1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
W [auth T]	Peptidase_S29	e8cviT1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
V [auth J]	Peptidase_S29	e8cviJ1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
U [auth c]	Peptidase_S29	e8cvic1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
S [auth I]	Peptidase_S29	e8cviI1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
R [auth b]	Peptidase_S29	e8cvib1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
P [auth H]	Peptidase_S29	e8cviH1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
O [auth a]	Peptidase_S29	e8cvia1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
N [auth Q]	Peptidase_S29	e8cviQ1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
M [auth G]	Peptidase_S29	e8cviG1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
L [auth Z]	Peptidase_S29	e8cviZ1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
K [auth P]	Peptidase_S29	e8cviP1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
J [auth F]	Peptidase_S29	e8cviF1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
I [auth Y]	Peptidase_S29	e8cviY1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
H [auth O]	Peptidase_S29	e8cviO1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
GA [auth g]	Peptidase_S29	e8cvig1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
G [auth E]	Peptidase_S29	e8cviE1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
FA [auth W]	Peptidase_S29	e8cviW1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
F [auth X]	Peptidase_S29	e8cviX1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
E [auth N]	Peptidase_S29	e8cviN1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
DA [auth f]	Peptidase_S29	e8cvif1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
D	Peptidase_S29	e8cviD1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
CA [auth V]	Peptidase_S29	e8cviV1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
C	Peptidase_S29	e8cviC1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
BA [auth L]	Peptidase_S29	e8cviL1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
B	Peptidase_S29	e8cviB1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
AA [auth e]	Peptidase_S29	e8cvie1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)
A	Peptidase_S29	e8cviA1	A: alpha arrays	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	PF00700	Bacterial flagellin C-terminal helical region (Flagellin_C)	Bacterial flagellin C-terminal helical region	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...	Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].	Domain
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	PF00669	Bacterial flagellin N-terminal helical region (Flagellin_N)	Bacterial flagellin N-terminal helical region	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	Flagellin	structural molecule activity	-	cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	IPR046358	Flagellin, C-terminal domain	Domain
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	IPR001029	Flagellin, N-terminal domain	Domain
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	IPR042187	Flagellin, C-terminal domain, subdomain 2	Homologous Superfamily
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	IPR001492	Flagellin	Family
A, AA [auth e], B, BA [auth L], C, A, AA [auth e], B, BA [auth L], C, CA [auth V], D, DA [auth f], E [auth N], EA [auth M], F [auth X], FA [auth W], G [auth E], GA [auth g], H [auth O], I [auth Y], J [auth F], K [auth P], L [auth Z], M [auth G], N [auth Q], O [auth a], P [auth H], Q [auth R], R [auth b], S [auth I], T [auth S], U [auth c], V [auth J], W [auth T], X [auth d], Y [auth K], Z [auth U]	IPR032826	Flagellin, H7-serospecific domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8CVI | pdb_00008cvi

Cryo-EM structure of the supercoiled EPEC H6 flagellar filament core Curly I waveform

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage