8CS9

Composite reconstruction of Class 1 of the erythrocyte ankyrin-1 complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyAnkyrin repeat8057716 3000154 SCOP2B (2022-06-29)
I [auth V]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
I [auth V]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
J [auth e]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
J [auth e]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
M [auth Y]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
M [auth Y]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
N [auth f]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
N [auth f]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
Q [auth Z]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)
Q [auth Z]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
R [auth g]SCOP2B SuperfamilyNucleobase/cation symporter 2 NCS2-like8092954 3002647 SCOP2B (2022-06-29)
R [auth g]SCOP2B SuperfamilyPhoshotransferase/anion transport protein8033412 3000490 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00023e8cs9A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Ankyrin repeat (From Topology)T: Ankyrin repeatF: PF00023ECOD (1.6)
B [auth K]PF00909e8cs9K1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
C [auth L]PF00909e8cs9L1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
D [auth Q]PF00909e8cs9Q1 A: alpha complex topologyX: Ammonium transporter-related (From Homology)H: Ammonium transporter-relatedT: Ammonium transporterF: PF00909ECOD (1.6)
E [auth X]PF00868e8cs9X4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00868ECOD (1.6)
E [auth X]PF00927e8cs9X2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF00927ECOD (1.6)
E [auth X]PF01841e8cs9X1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: PF01841ECOD (1.6)
F [auth P]PF01102e8cs9P1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
G [auth R]PF01102e8cs9R1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
H [auth a]PF01102e8cs9a1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
K [auth S]PF01102e8cs9S1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
L [auth b]PF01102e8cs9b1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
O [auth T]PF01102e8cs9T1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
P [auth c]PF01102e8cs9c1 A: extended segmentsX: Glycophorin-A transmembrane domain (From Topology)H: Glycophorin-A transmembrane domain (From Topology)T: Glycophorin-A transmembrane domainF: PF01102ECOD (1.6)
I [auth V]PF00955e8cs9V1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
I [auth V]PF07565e8cs9V2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
J [auth e]PF00955e8cs9e1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
J [auth e]PF07565e8cs9e2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
M [auth Y]PF00955e8cs9Y1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
M [auth Y]PF07565e8cs9Y2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
N [auth f]PF00955e8cs9f1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
N [auth f]PF07565e8cs9f2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)
Q [auth Z]PF00955e8cs9Z1 A: alpha complex topologyX: Uracil Transporter UraA (From Topology)H: Uracil Transporter UraA (From Topology)T: Uracil Transporter UraAF: PF00955ECOD (1.6)
Q [auth Z]PF07565e8cs9Z2 A: a+b three layersX: Phoshotransferase/anion transport protein (From Topology)H: Phoshotransferase/anion transport protein (From Topology)T: Phoshotransferase/anion transport proteinF: PF07565ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00023Ankyrin repeat (Ank)Ankyrin repeat- Repeat
B [auth K]PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
C [auth L],
D [auth Q]
PF00909Ammonium Transporter Family (Ammonium_transp)Ammonium Transporter Family- Family
E [auth X]PF00868Transglutaminase family (Transglut_N)Transglutaminase family- Domain
E [auth X]PF00927Transglutaminase family, C-terminal ig like domain (Transglut_C)Transglutaminase family, C-terminal ig like domain- Domain
E [auth X]PF01841Transglutaminase-like superfamily (Transglut_core)Transglutaminase-like superfamily- Family
F [auth P]PF01102Glycophorin A (Glycophorin_A)Glycophorin A- Family
PF01102Glycophorin A (Glycophorin_A)Glycophorin A- Family
PF00955HCO3- transporter family (HCO3_cotransp)HCO3- transporter family- Family
PF07565Band 3 cytoplasmic domain (Band_3_cyto)Band 3 cytoplasmic domainThis family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic ...This family contains the cytoplasmic domain of the Band 3 anion exchange proteins that exchange Cl-/HCO3-. Band 3 constitutes the most abundant polypeptide in the red blood cell membrane, comprising 25% of the total membrane protein. The cytoplasmic domain of band 3 functions primarily as an anchoring site for other membrane-associated proteins. Included among the protein ligands of cdb3 are ankyrin, protein 4.2, protein 4.1, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), phosphofructokinase, aldolase, hemoglobin, hemichromes, and the protein tyrosine kinase (p72syk). [1]
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ankyrin-1
B [auth K]Blood group Rh(CE) polypeptide
C [auth L],
D [auth Q]
Ammonium transporter Rh type A
E [auth X]Protein 4.2
F [auth P]Glycophorin-B- -
Glycophorin-A -
Band 3 anion transport protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
IPR040745Ankyrin, UPA domainDomain
IPR000906ZU5 domainDomain
IPR002110Ankyrin repeatRepeat
IPR011029Death-like domain superfamilyHomologous Superfamily
IPR000488Death domainDomain
B [auth K]IPR002229Blood group Rhesus C/E/D polypeptideFamily
B [auth K]IPR029020Ammonium/urea transporterHomologous Superfamily
B [auth K]IPR024041Ammonium transporter AmtB-like domainDomain
C [auth L],
D [auth Q]
IPR002229Blood group Rhesus C/E/D polypeptideFamily
C [auth L],
D [auth Q]
IPR029020Ammonium/urea transporterHomologous Superfamily
C [auth L],
D [auth Q]
IPR024041Ammonium transporter AmtB-like domainDomain
E [auth X]IPR036985Transglutaminase-like superfamilyHomologous Superfamily
E [auth X]IPR036238Transglutaminase, C-terminal domain superfamilyHomologous Superfamily
E [auth X]IPR013808Transglutaminase, active siteActive Site
E [auth X]IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth X]IPR002931Transglutaminase-likeDomain
E [auth X]IPR014756Immunoglobulin E-setHomologous Superfamily
E [auth X]IPR038765Papain-like cysteine peptidase superfamilyHomologous Superfamily
E [auth X]IPR001102Transglutaminase, N-terminalDomain
E [auth X]IPR008958Transglutaminase, C-terminalDomain
E [auth X]IPR023608Protein-glutamine gamma-glutamyltransferase, animalFamily
F [auth P]IPR018938Glycophorin, conserved siteConserved Site
F [auth P]IPR001195GlycophorinFamily
F [auth P]IPR049535Glycophorin A/BFamily
IPR018938Glycophorin, conserved siteConserved Site
IPR001195GlycophorinFamily
IPR049535Glycophorin A/BFamily
IPR013769Band 3 cytoplasmic domainDomain
IPR001717Anion exchange proteinFamily
IPR003020Bicarbonate transporter, eukaryoticFamily
IPR011531Bicarbonate transporter-like, transmembrane domainDomain
IPR002977Anion exchange protein 1Family
IPR016152Phosphotransferase/anion transporterHomologous Superfamily
IPR018241Anion exchange, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP16157
B [auth K]PharosP18577
C [auth L],
D [auth Q]
PharosQ02094
E [auth X]PharosP16452
F [auth P]PharosP06028
PharosP02724
PharosP02730