8CDR

Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth A]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
L [auth Aa]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8043947 3000100 SCOP2B (2022-06-29)
L [auth Aa]SCOP2B SuperfamilyRas-like P-loop GTPases8043945 3002022 SCOP2B (2022-06-29)
L [auth Aa]SCOP2B SuperfamilyEF-Tu post-G domain-like8043943 3002024 SCOP2B (2022-06-29)
L [auth Aa]SCOP2B SuperfamilyEF-G C-terminal domain-like8043948 3001287 SCOP2B (2022-06-29)
L [auth Aa]SCOP2B SuperfamilyEF-G C-terminal domain-like8043949 3001287 SCOP2B (2022-06-29)
M [auth B]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
P [auth C]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8095970 3001045 SCOP2B (2022-06-29)
S [auth D]SCOP2B SuperfamilyRibosomal protein L19 (L19e)8077485 3000890 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2B (2022-06-29)
Z [auth FF]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
AA [auth G]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
BA [auth GG]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052815 3002143 SCOP2B (2022-06-29)
BA [auth GG]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
CA [auth H]SCOP2B Superfamily50S Ribosomal protein L14-like8103364 3000433 SCOP2B (2022-06-29)
C [auth 2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8093614 3000068 SCOP2B (2022-06-29)
DA [auth HH]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
FA [auth II]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
GA [auth J]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
HA [auth JJ]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
HA [auth JJ]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
IA [auth K]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
JA [auth KK]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
KA [auth L]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
MA [auth M]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
NA [auth MM]SCOP2B SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2B (2022-06-29)
OA [auth N]SCOP2B SuperfamilyRibosomal protein L29e8053045 3002157 SCOP2B (2022-06-29)
PA [auth NN]SCOP2B SuperfamilyRL5-like8073884 3001709 SCOP2B (2022-06-29)
QA [auth O]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
RA [auth OO]SCOP2B SuperfamilyRibosomal protein L13e-like8053159 3002162 SCOP2B (2022-06-29)
WA [auth QQ]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyNucleic acid-binding proteins8063430 3000135 SCOP2B (2022-06-29)
XA [auth R]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
YA [auth S]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
AB [auth U]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
BB [auth V]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
CB [auth W]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
DB [auth X]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
F [auth 5]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)
HB [auth b]SCOP2B SuperfamilyZn-binding ribosomal proteins8103126 3001320 SCOP2B (2022-06-29)
JB [auth d]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2B (2022-06-29)
KB [auth e]SCOP2B SuperfamilyRibosomal S3Ae-like8053211 3002166 SCOP2B (2022-06-29)
NB [auth h]SCOP2B SuperfamilyAlpha-L RNA-binding motif8052758 3001473 SCOP2B (2022-06-29)
NB [auth h]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8052760 3000334 SCOP2B (2022-06-29)
NB [auth h]SCOP2B SuperfamilyNucleic acid-binding proteins8052759 3000135 SCOP2B (2022-06-29)
OB [auth i]SCOP2B SuperfamilyRibosomal protein S78065993 3000799 SCOP2B (2022-06-29)
PB [auth j]SCOP2B SuperfamilyGS N-terminal domain-like8053173 3000408 SCOP2B (2022-06-29)
G [auth 6]SCOP2B SuperfamilyRibosomal protein S30e-like8053451 3002190 SCOP2B (2022-06-29)
UB [auth o]SCOP2B SuperfamilyNucleic acid-binding proteins8052738 3000135 SCOP2B (2022-06-29)
UB [auth o]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052736 3002138 SCOP2B (2022-06-29)
VB [auth p]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
VB [auth p]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
WB [auth q]SCOP2B SuperfamilyTranslational machinery components8095805 3000571 SCOP2B (2022-06-29)
XB [auth r]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
YB [auth s]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8103366 3000100 SCOP2B (2022-06-29)
AC [auth u]SCOP2B SuperfamilyS13-like H2TH domain8098450 3000053 SCOP2B (2022-06-29)
CC [auth w]SCOP2B SuperfamilyRibosomal protein S108098648 3001336 SCOP2B (2022-06-29)
DC [auth x]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
EC [auth y]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]PF01282e8cdr01 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
J [auth A]PF00572e8cdrA1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
L [auth Aa]PF03144e8cdrAa1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
L [auth Aa]PF03764e8cdrAa2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
L [auth Aa]PF00679e8cdrAa3 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
L [auth Aa]PF14492e8cdrAa5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
L [auth Aa]PF00009e8cdrAa4 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
M [auth B]PF00237e8cdrB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
P [auth C]PF17135e8cdrC1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
S [auth D]PF01280e8cdrD1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
S [auth D]PF01280e8cdrD2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
B [auth 1]PF03297e8cdr11 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
T [auth DD]PF00466e8cdrDD1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
T [auth DD]PF17777e8cdrDD2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
V [auth E]F_UNCLASSIFIEDe8cdrE2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
V [auth E]PF01775e8cdrE1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
W [auth EE]PF00181e8cdrEE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
W [auth EE]PF03947e8cdrEE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
X [auth Ee]PF00298e8cdrEe1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
X [auth Ee]PF03946e8cdrEe2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
Y [auth F]PF01157e8cdrF1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
Z [auth FF]PF00297e8cdrFF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
AA [auth G]PF01776e8cdrG1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
BA [auth GG]PF00573e8cdrGG1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
BA [auth GG]PF14374e8cdrGG2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
CA [auth H]PF00238e8cdrH1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
C [auth 2]PF01283e8cdr21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
DA [auth HH]PF14204,PF17144e8cdrHH1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
EA [auth I]PF01246e8cdrI1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
FA [auth II]PF01159e8cdrII1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159ECOD (1.6)
GA [auth J]PF00276,PF03939e8cdrJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
HA [auth JJ]PF00327,PF08079e8cdrJJ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
IA [auth K]PF16906e8cdrK1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
JA [auth KK]PF01248e8cdrKK1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
KA [auth L]PF01777e8cdrL1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01777ECOD (1.6)
LA [auth LL]PF00347e8cdrLL1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
MA [auth M]PF00828e8cdrM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
D [auth 3]PF01667e8cdr31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
NA [auth MM]PF00252e8cdrMM1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
OA [auth N]PF01779e8cdrN1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
PA [auth NN]PF00281,PF00673e8cdrNN1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
QA [auth O]PF01248e8cdrO1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
RA [auth OO]PF01294e8cdrOO1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
SA [auth P]PF01198e8cdrP1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
TA [auth PP]PF00467,PF01929e8cdrPP1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
VA [auth Q]PF01655e8cdrQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
WA [auth QQ]PF00827e8cdrQQ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
E [auth 4]PF01200e8cdr41 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
XA [auth R]PF01247e8cdrR1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
YA [auth S]PF01199e8cdrS1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
ZA [auth T]PF00831e8cdrT1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
AB [auth U]PF01158e8cdrU1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
BB [auth V]PF01907e8cdrV1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
CB [auth W]PF01781e8cdrW1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
DB [auth X]PF00832e8cdrX1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
EB [auth Y]PF01020e8cdrY1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
FB [auth Z]PF05162e8cdrZ1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
GB [auth a]PF00935e8cdra1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
F [auth 5]PF00253e8cdr51 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
HB [auth b]PF01780e8cdrb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
JB [auth d]PF00318e8cdrd1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
KB [auth e]PF01015e8cdre2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
KB [auth e]PF01015e8cdre1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
LB [auth f]PF03719e8cdrf1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
LB [auth f]PF00333e8cdrf2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
LB [auth f]PF00333e8cdrf3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
MB [auth g]PF00189e8cdrg1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
MB [auth g]PF07650e8cdrg2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
NB [auth h]PF00900e8cdrh1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
NB [auth h]PF00467,PF16121e8cdrh2 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
NB [auth h]PF00900,PF01479,PF08071e8cdrh3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
OB [auth i]PF00177e8cdri1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
PB [auth j]PF01092e8cdrj1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
QB [auth k]PF01251e8cdrk2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
G [auth 6]PF04758e8cdr61 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
RB [auth l]PF01201e8cdrl1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
SB [auth m]PF00163,PF01479e8cdrm1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
TB [auth n]PF03501e8cdrn1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
UB [auth o]PF00366,PF16205e8cdro1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
VB [auth p]PF08069e8cdrp2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
VB [auth p]PF00312e8cdrp1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
WB [auth q]PF00411e8cdrq1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
XB [auth r]PF00203e8cdrr1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
YB [auth s]PF00380e8cdrs1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
ZB [auth t]PF00833e8cdrt1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
AC [auth u]PF00416e8cdru1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
H [auth 7]PF00400e8cdr71 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
BC [auth v]PF01090e8cdrv1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
CC [auth w]PF00338e8cdrw1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
DC [auth x]PF01249e8cdrx1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
EC [auth y]PF00410e8cdry1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
EC [auth y]PF00410e8cdry2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
FC [auth z]PF00164e8cdrz1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
I [auth 8]PF01599e8cdr81 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]40S ribosomal protein S24-A
J [auth A]60S ribosomal protein L16-A
K [auth AA]25S ribosomal RNA---
L [auth Aa]Elongation factor 2
M [auth B]60S ribosomal protein L17-A
N [auth BB]5S ribosomal RNA---
O [auth Bb]Transfer RNA Phe---
P [auth C]60S ribosomal protein L18-A
Q [auth CC]5.8S ribosomal RNA---
R [auth Cc]Transfer RNA fMet---
S [auth D]60S ribosomal protein L19-A
B [auth 1]40S ribosomal protein S25-A
T [auth DD]60S acidic ribosomal protein P0
U [auth Dd]Messenger RNA---
V [auth E]60S ribosomal protein L20-A
W [auth EE]60S ribosomal protein L2-A
X [auth Ee]60S ribosomal protein L12-A
Y [auth F]60S ribosomal protein L21-A
Z [auth FF]60S ribosomal protein L3
AA [auth G]60S ribosomal protein L22-A
BA [auth GG]60S ribosomal protein L4-A
CA [auth H]60S ribosomal protein L23-A
C [auth 2]40S ribosomal protein S26
DA [auth HH]60S ribosomal protein L5
EA [auth I]60S ribosomal protein L24-A
FA [auth II]60S ribosomal protein L6-A
GA [auth J]60S ribosomal protein L25
HA [auth JJ]60S ribosomal protein L7-A
IA [auth K]60S ribosomal protein L26-A
JA [auth KK]60S ribosomal protein L8-A
KA [auth L]60S ribosomal protein L27-A
LA [auth LL]60S ribosomal protein L9-A
MA [auth M]60S ribosomal protein L28
D [auth 3]40S ribosomal protein S27-A
NA [auth MM]60S ribosomal protein L10
OA [auth N]60S ribosomal protein L29
PA [auth NN]60S ribosomal protein L11-A
QA [auth O]60S ribosomal protein L30
RA [auth OO]60S ribosomal protein L13-A
SA [auth P]60S ribosomal protein L31-A
TA [auth PP]60S ribosomal protein L14-A
UA [auth Pp]dipeptide---
VA [auth Q]60S ribosomal protein L32
WA [auth QQ]60S ribosomal protein L15-A
E [auth 4]40S ribosomal protein S28-A
XA [auth R]60S ribosomal protein L33-A
YA [auth S]60S ribosomal protein L34-A
ZA [auth T]60S ribosomal protein L35-A
AB [auth U]60S ribosomal protein L36-A
BB [auth V]60S ribosomal protein L37-A
CB [auth W]60S ribosomal protein L38
DB [auth X]60S ribosomal protein L39
EB [auth Y]Ubiquitin-60S ribosomal protein L40
FB [auth Z]60S ribosomal protein L41-A
GB [auth a]60S ribosomal protein L42-A
F [auth 5]HLJ1_G0030400.mRNA.1.CDS.1
HB [auth b]60S ribosomal protein L43-A
IB [auth c]18S ribosomal RNA---
JB [auth d]40S ribosomal protein S0-A
KB [auth e]40S ribosomal protein S1-A
LB [auth f]40S ribosomal protein S2
MB [auth g]RPS3 isoform 1
NB [auth h]40S ribosomal protein S4-A
OB [auth i]40S ribosomal protein S5
PB [auth j]40S ribosomal protein S6-A
QB [auth k]40S ribosomal protein S7-A
G [auth 6]40S ribosomal protein S30-A
RB [auth l]40S ribosomal protein S8-B
SB [auth m]40S ribosomal protein S9-A
TB [auth n]40S ribosomal protein S10-A
UB [auth o]40S ribosomal protein S11-A
VB [auth p]40S ribosomal protein S13
WB [auth q]40S ribosomal protein S14-A
XB [auth r]40S ribosomal protein S15
YB [auth s]40S ribosomal protein S16-A
ZB [auth t]40S ribosomal protein S17-A
AC [auth u]40S ribosomal protein S18-A
H [auth 7]Guanine nucleotide-binding protein subunit beta-like protein
BC [auth v]40S ribosomal protein S19-A
CC [auth w]40S ribosomal protein S20
DC [auth x]40S ribosomal protein S21-A
EC [auth y]40S ribosomal protein S22-A
FC [auth z]40S ribosomal protein S23-A
I [auth 8]Ubiquitin-40S ribosomal protein S31

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR001976Small ribosomal subunit protein eS24Family
A [auth 0]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
A [auth 0]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
J [auth A]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth A]IPR005822Large ribosomal subunit protein uL13Family
J [auth A]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth A]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
L [auth Aa]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
L [auth Aa]IPR000795Translational (tr)-type GTP-binding domainDomain
L [auth Aa]IPR000640Elongation factor EFG, domain V-likeDomain
L [auth Aa]IPR031157Tr-type G domain, conserved siteConserved Site
L [auth Aa]IPR035647EF-G domain III/V-likeHomologous Superfamily
L [auth Aa]IPR041095Elongation Factor G, domain IIDomain
L [auth Aa]IPR004161Translation elongation factor EFTu-like, domain 2Domain
L [auth Aa]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
L [auth Aa]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
L [auth Aa]IPR005225Small GTP-binding protein domainDomain
L [auth Aa]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
L [auth Aa]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
M [auth B]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
M [auth B]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
M [auth B]IPR001063Large ribosomal subunit protein uL22Family
M [auth B]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
P [auth C]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth C]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
P [auth C]IPR000039Large ribosomal subunit protein eL18Family
P [auth C]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
S [auth D]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
S [auth D]IPR039547Large ribosomal subunit protein eL19Family
S [auth D]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
S [auth D]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
S [auth D]IPR000196Large ribosomal subunit protein eL19 domainDomain
S [auth D]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
B [auth 1]IPR004977Small ribosomal subunit protein eS25Family
B [auth 1]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
T [auth DD]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
T [auth DD]IPR001790Large ribosomal subunit protein uL10Family
T [auth DD]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
T [auth DD]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
T [auth DD]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
V [auth E]IPR028877Large ribosomal subunit protein eL20Family
V [auth E]IPR023573Large ribosomal subunit protein eL20 domainDomain
V [auth E]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
W [auth EE]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
W [auth EE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth EE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth EE]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
W [auth EE]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth EE]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
W [auth EE]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
W [auth EE]IPR002171Large ribosomal subunit protein uL2Family
X [auth Ee]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
X [auth Ee]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
X [auth Ee]IPR000911Ribosomal protein uL11Family
X [auth Ee]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
X [auth Ee]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
X [auth Ee]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
Y [auth F]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
Y [auth F]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
Y [auth F]IPR001147Large ribosomal subunit protein eL21Family
Y [auth F]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Z [auth FF]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
Z [auth FF]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
Z [auth FF]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
Z [auth FF]IPR000597Large ribosomal subunit protein uL3Family
Z [auth FF]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
AA [auth G]IPR002671Large ribosomal subunit protein eL22Family
AA [auth G]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
BA [auth GG]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
BA [auth GG]IPR002136Large ribosomal subunit protein uL4Family
BA [auth GG]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
BA [auth GG]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
BA [auth GG]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
CA [auth H]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
CA [auth H]IPR000218Large ribosomal subunit protein uL14Family
CA [auth H]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
C [auth 2]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
C [auth 2]IPR000892Small ribosomal subunit protein eS26Family
C [auth 2]IPR047864Ribosomal protein eS26, conserved siteConserved Site
DA [auth HH]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
DA [auth HH]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
EA [auth I]IPR000988Large ribosomal subunit protein eL24-relatedFamily
EA [auth I]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
EA [auth I]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
FA [auth II]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
FA [auth II]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth II]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
FA [auth II]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth II]IPR000915Large ribosomal subunit protein eL6Family
GA [auth J]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
GA [auth J]IPR013025Large ribosomal subunit protein uL23-likeFamily
GA [auth J]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
GA [auth J]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
GA [auth J]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
HA [auth JJ]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
HA [auth JJ]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
HA [auth JJ]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
HA [auth JJ]IPR039699Large ribosomal subunit protein uL30Family
HA [auth JJ]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
HA [auth JJ]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
HA [auth JJ]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IA [auth K]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IA [auth K]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IA [auth K]IPR005824KOWDomain
IA [auth K]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IA [auth K]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
IA [auth K]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
JA [auth KK]IPR001921Large ribosomal subunit protein eL8Family
JA [auth KK]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JA [auth KK]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
JA [auth KK]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
JA [auth KK]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
KA [auth L]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
KA [auth L]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
KA [auth L]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KA [auth L]IPR001141Large ribosomal subunit protein eL27Family
KA [auth L]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
LA [auth LL]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
LA [auth LL]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
LA [auth LL]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
LA [auth LL]IPR000702Large ribosomal subunit protein uL6-likeFamily
MA [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
MA [auth M]IPR030878Large ribosomal subunit protein uL15Family
MA [auth M]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
MA [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
D [auth 3]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
D [auth 3]IPR000592Small ribosomal subunit protein eS27Family
D [auth 3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth MM]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
NA [auth MM]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
NA [auth MM]IPR016180Large ribosomal subunit protein uL16 domainDomain
NA [auth MM]IPR047873Large ribosomal subunit protein uL16Family
NA [auth MM]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
OA [auth N]IPR002673Large ribosomal subunit protein eL29Family
PA [auth NN]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
PA [auth NN]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
PA [auth NN]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
PA [auth NN]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
PA [auth NN]IPR002132Large ribosomal subunit protein uL5Family
QA [auth O]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
QA [auth O]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
QA [auth O]IPR039109Large ribosomal subunit protein eL30-likeFamily
QA [auth O]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RA [auth OO]IPR001380Large ribosomal subunit protein eL13Family
RA [auth OO]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
SA [auth P]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
SA [auth P]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
SA [auth P]IPR000054Large ribosomal subunit protein eL31Family
TA [auth PP]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth PP]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth PP]IPR039660Large ribosomal subunit protein eL14Family
TA [auth PP]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
TA [auth PP]IPR002784Large ribosomal subunit protein eL14 domainDomain
TA [auth PP]IPR005824KOWDomain
VA [auth Q]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
VA [auth Q]IPR001515Large ribosomal subunit protein eL32Family
VA [auth Q]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
WA [auth QQ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
WA [auth QQ]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
WA [auth QQ]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
WA [auth QQ]IPR000439Large ribosomal subunit protein eL15Family
E [auth 4]IPR028626Ribosomal protein eS28 conserved siteConserved Site
E [auth 4]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth 4]IPR000289Small ribosomal subunit protein eS28Family
XA [auth R]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
XA [auth R]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
XA [auth R]IPR001780Large ribosomal subunit protein eL33Family
XA [auth R]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
YA [auth S]IPR008195Large ribosomal subunit protein eL34Family
YA [auth S]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
ZA [auth T]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
ZA [auth T]IPR001854Large ribosomal subunit protein uL29Family
ZA [auth T]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
ZA [auth T]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AB [auth U]IPR000509Large ribosomal subunit protein eL36Family
AB [auth U]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
BB [auth V]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
BB [auth V]IPR001569Large ribosomal subunit protein eL37Family
BB [auth V]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
BB [auth V]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CB [auth W]IPR002675Large ribosomal subunit protein eL38Family
CB [auth W]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
DB [auth X]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
DB [auth X]IPR000077Large ribosomal subunit protein eL39Family
DB [auth X]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
EB [auth Y]IPR019954Ubiquitin conserved siteConserved Site
EB [auth Y]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
EB [auth Y]IPR000626Ubiquitin-like domainDomain
EB [auth Y]IPR019956Ubiquitin domainDomain
EB [auth Y]IPR001975Large ribosomal subunit protein eL40 domainDomain
EB [auth Y]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
FB [auth Z]IPR007836Large ribosomal subunit protein eS32Family
GB [auth a]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GB [auth a]IPR000552Large ribosomal subunit protein eL42Family
F [auth 5]IPR001209Small ribosomal subunit protein uS14Family
F [auth 5]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
F [auth 5]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
F [auth 5]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
HB [auth b]IPR002674Large ribosomal subunit protein eL43Family
HB [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HB [auth b]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
JB [auth d]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
JB [auth d]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
JB [auth d]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
JB [auth d]IPR001865Small ribosomal subunit protein uS2Family
JB [auth d]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
KB [auth e]IPR001593Small ribosomal subunit protein eS1Family
KB [auth e]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
KB [auth e]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
LB [auth f]IPR000851Small ribosomal subunit protein uS5Family
LB [auth f]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
LB [auth f]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
LB [auth f]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
LB [auth f]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LB [auth f]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
LB [auth f]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MB [auth g]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
MB [auth g]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
MB [auth g]IPR004044K Homology domain, type 2Domain
MB [auth g]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
MB [auth g]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
MB [auth g]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
MB [auth g]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
NB [auth h]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
NB [auth h]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
NB [auth h]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
NB [auth h]IPR002942RNA-binding S4 domainDomain
NB [auth h]IPR013845Small ribosomal subunit protein eS4, central regionDomain
NB [auth h]IPR000876Small ribosomal subunit protein eS4Family
NB [auth h]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NB [auth h]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
NB [auth h]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
NB [auth h]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
NB [auth h]IPR005824KOWDomain
OB [auth i]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OB [auth i]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OB [auth i]IPR000235Small ribosomal subunit protein uS7Family
OB [auth i]IPR023798Small ribosomal subunit protein uS7 domainDomain
OB [auth i]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
PB [auth j]IPR014401Small ribosomal subunit protein eS6-likeFamily
PB [auth j]IPR001377Small ribosomal subunit protein eS6Family
PB [auth j]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
QB [auth k]IPR000554Small ribosomal subunit protein eS7Family
QB [auth k]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
G [auth 6]IPR006846Small ribosomal subunit protein eS30Family
RB [auth l]IPR001047Small ribosomal subunit protein eS8Family
RB [auth l]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
RB [auth l]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
RB [auth l]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
SB [auth m]IPR002942RNA-binding S4 domainDomain
SB [auth m]IPR022801Small ribosomal subunit protein uS4Family
SB [auth m]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
SB [auth m]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
SB [auth m]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
SB [auth m]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
TB [auth n]IPR037447Small ribosomal subunit protein eS10Family
TB [auth n]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
TB [auth n]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
TB [auth n]IPR005326Plectin/eS10, N-terminalDomain
UB [auth o]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
UB [auth o]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
UB [auth o]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UB [auth o]IPR000266Small ribosomal subunit protein uS17Family
UB [auth o]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
VB [auth p]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
VB [auth p]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
VB [auth p]IPR000589Small ribosomal subunit protein uS15Family
VB [auth p]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
WB [auth q]IPR001971Small ribosomal subunit protein uS11Family
WB [auth q]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
WB [auth q]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
XB [auth r]IPR002222Small ribosomal subunit protein uS19Family
XB [auth r]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XB [auth r]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
XB [auth r]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
YB [auth s]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
YB [auth s]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
YB [auth s]IPR000754Small ribosomal subunit protein uS9Family
YB [auth s]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
ZB [auth t]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
ZB [auth t]IPR001210Small ribosomal subunit protein eS17Family
ZB [auth t]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
AC [auth u]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
AC [auth u]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
AC [auth u]IPR001892Small ribosomal subunit protein uS13Family
AC [auth u]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
H [auth 7]IPR019775WD40 repeat, conserved siteConserved Site
H [auth 7]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
H [auth 7]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
H [auth 7]IPR045223Small ribosomal subunit protein RACK1-likeFamily
H [auth 7]IPR001680WD40 repeatRepeat
H [auth 7]IPR020472G-protein beta WD-40 repeatRepeat
BC [auth v]IPR001266Small ribosomal subunit protein eS19Family
BC [auth v]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
BC [auth v]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
BC [auth v]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
CC [auth w]IPR001848Small ribosomal subunit protein uS10Family
CC [auth w]IPR027486Small ribosomal subunit protein uS10 domainDomain
CC [auth w]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
CC [auth w]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
CC [auth w]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
DC [auth x]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
DC [auth x]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
DC [auth x]IPR001931Small ribosomal subunit protein eS21Family
EC [auth y]IPR000630Small ribosomal subunit protein uS8Family
EC [auth y]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
EC [auth y]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
FC [auth z]IPR006032Small ribosomal subunit protein uS12Family
FC [auth z]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FC [auth z]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
I [auth 8]IPR019954Ubiquitin conserved siteConserved Site
I [auth 8]IPR000626Ubiquitin-like domainDomain
I [auth 8]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
I [auth 8]IPR002906Small ribosomal subunit protein eS31Domain
I [auth 8]IPR019956Ubiquitin domainDomain
I [auth 8]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
I [auth 8]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
K [auth AA]1MA Parent Component: A

K [auth AA]5MC Parent Component: C

K [auth AA]A2M Parent Component: A

K [auth AA]OMC Parent Component: C

K [auth AA]OMG Parent Component: G

K [auth AA]OMU Parent Component: U

K [auth AA]UR3 Parent Component: U

L [auth Aa]DDE Parent Component: HIS

RESIDAA0040

PSI-MOD :  2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine MOD:00049
O [auth Bb]YYG Parent Component: G

RESIDAA0040

IB [auth c]4AC RESIDAA0040

IB [auth c]A2M Parent Component: A

RESIDAA0040

IB [auth c]B8N RESIDAA0040

IB [auth c]G7M Parent Component: G

RESIDAA0040

IB [auth c]MA6 Parent Component: A

RESIDAA0040

IB [auth c]OMC Parent Component: C

RESIDAA0040

IB [auth c]OMG Parent Component: G

RESIDAA0040

IB [auth c]OMU Parent Component: U

RESIDAA0040