8C9M | pdb_00008c9m

HERV-K Gag immature lattice


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Fe8c9mF1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)
Ee8c9mE1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)
De8c9mD1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)
Ce8c9mC1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)
Be8c9mB1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)
Ae8c9mA1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Methyltransf_4F:ECOD (20:10:01)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A, B, C, D, E
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A, B, C, D, E
IPR050195Primate lentivirus group Gag polyprotein-likeDomain
A, B, C, D, E
IPR038124Beta-retroviral matrix superfamilyHomologous Superfamily
A, B, C, D, E
IPR003322Beta-retroviral matrix proteinDomain
A, B, C, D, E
IPR001878Zinc finger, CCHC-typeDomain
A, B, C, D, E
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A, B, C, D, E
IPR010999Retroviral matrix proteinHomologous Superfamily
A, B, C, D, E
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily