Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth R]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
K [auth S]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
L [auth U]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
M [auth V]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
N [auth W]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
O [auth Y]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
P [auth Z]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
F [auth J]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
H [auth O]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
I [auth Q]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 2]PF00468e8c9521 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
J [auth R]PF00829e8c95R1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
K [auth S]PF00237e8c95S1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
L [auth U]PF00467,PF17136e8c95U1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
M [auth V]PF01386e8c95V1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
N [auth W]PF01016e8c95W1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
O [auth Y]PF00831e8c95Y1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
P [auth Z]PF00327e8c95Z1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
D [auth E]PF00573e8c95E1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
E [auth F]PF00281,PF00673e8c95F1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
F [auth J]PF00572e8c95J1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
G [auth L]PF00828e8c95L1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
H [auth O]PF00861e8c95O1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
I [auth Q]PF00453e8c95Q1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
J [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
K [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
L [auth U]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
L [auth U]PF00467KOW motif (KOW)KOW motif- Family
M [auth V]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
N [auth W]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
O [auth Y]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
P [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
D [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
E [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
E [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
F [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
G [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
H [auth O]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
I [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 2]50S ribosomal protein L34
J [auth R]50S ribosomal protein L21
K [auth S]50S ribosomal protein L22
L [auth U]50S ribosomal protein L24
M [auth V]50S ribosomal protein L25
N [auth W]50S ribosomal protein L27
O [auth Y]50S ribosomal protein L29
P [auth Z]50S ribosomal protein L30
B [auth A]23S rRNA---
C [auth B]5S rRNA---
D [auth E]50S ribosomal protein L4
E [auth F]50S ribosomal protein L5
F [auth J]50S ribosomal protein L13
G [auth L]50S ribosomal protein L15
H [auth O]50S ribosomal protein L18
I [auth Q]50S ribosomal protein L20

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
A [auth 2]IPR000271Large ribosomal subunit protein bL34Family
J [auth R]IPR028909Large ribosomal subunit protein bL21-likeFamily
J [auth R]IPR001787Large ribosomal subunit protein bL21Family
J [auth R]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
J [auth R]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
K [auth S]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
K [auth S]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
K [auth S]IPR001063Large ribosomal subunit protein uL22Family
K [auth S]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
K [auth S]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
L [auth U]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth U]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
L [auth U]IPR003256Large ribosomal subunit protein uL24Family
L [auth U]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
L [auth U]IPR005824KOWDomain
L [auth U]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
M [auth V]IPR020055Ribosomal protein bL25, short-formFamily
M [auth V]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
M [auth V]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
M [auth V]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
N [auth W]IPR001684Large ribosomal subunit protein bL27Family
N [auth W]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
O [auth Y]IPR001854Large ribosomal subunit protein uL29Family
O [auth Y]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
O [auth Y]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
P [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
P [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
P [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
P [auth Z]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
D [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
D [auth E]IPR002136Large ribosomal subunit protein uL4Family
D [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
E [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
E [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
E [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
E [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
E [auth F]IPR002132Large ribosomal subunit protein uL5Family
F [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
F [auth J]IPR005822Large ribosomal subunit protein uL13Family
F [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
F [auth J]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
G [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
G [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
G [auth L]IPR030878Large ribosomal subunit protein uL15Family
G [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
G [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
H [auth O]IPR005484Large ribosomal subunit protein uL18Family
H [auth O]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
I [auth Q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
I [auth Q]IPR005813Large ribosomal subunit protein bL20Family