Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 0]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2022-06-29)
K [auth N]SCOP2B SuperfamilyProkaryotic ribosomal protein L178035409 3000995 SCOP2B (2022-06-29)
L [auth O]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
M [auth P]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2022-06-29)
N [auth Q]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2022-06-29)
O [auth R]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2022-06-29)
P [auth S]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
Q [auth U]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
R [auth V]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
S [auth W]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
T [auth Y]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
U [auth Z]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2022-06-29)
E [auth D]SCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2022-06-29)
F [auth E]SCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
H [auth J]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
I [auth K]SCOP2B Superfamily50S Ribosomal protein L14-like8103358 3000433 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 0]PF01783e8c9401 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
J [auth L]PF00828e8c94L1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
K [auth N]PF01196e8c94N1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
L [auth O]PF00861e8c94O1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
M [auth P]PF01245e8c94P1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
N [auth Q]PF00453e8c94Q1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
O [auth R]PF00829e8c94R1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
P [auth S]PF00237e8c94S1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
Q [auth U]PF00467,PF17136e8c94U1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
R [auth V]PF01386e8c94V1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
S [auth W]PF01016e8c94W1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
B [auth 2]PF00468e8c9421 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
T [auth Y]PF00831e8c94Y1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
U [auth Z]PF00327e8c94Z1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
E [auth D]PF00297e8c94D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
F [auth E]PF00573e8c94E1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
G [auth F]PF00281,PF00673e8c94F1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
H [auth J]PF00572e8c94J1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
I [auth K]PF00238e8c94K1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
J [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
K [auth N]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
L [auth O]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
M [auth P]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
N [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
O [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
P [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Q [auth U]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
Q [auth U]PF00467KOW motif (KOW)KOW motif- Family
R [auth V]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
S [auth W]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
B [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
T [auth Y]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
U [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
E [auth D]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
G [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
G [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
H [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
I [auth K]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]50S ribosomal protein L32
J [auth L]50S ribosomal protein L15
K [auth N]50S ribosomal protein L17
L [auth O]50S ribosomal protein L18
M [auth P]50S ribosomal protein L19
N [auth Q]50S ribosomal protein L20
O [auth R]50S ribosomal protein L21
P [auth S]50S ribosomal protein L22
Q [auth U]50S ribosomal protein L24
R [auth V]50S ribosomal protein L25
S [auth W]50S ribosomal protein L27
B [auth 2]50S ribosomal protein L34
T [auth Y]50S ribosomal protein L29
U [auth Z]50S ribosomal protein L30
C [auth A]23S rRNA---
D [auth B]5S rRNA---
E [auth D]50S ribosomal protein L3
F [auth E]50S ribosomal protein L4
G [auth F]50S ribosomal protein L5
H [auth J]50S ribosomal protein L13
I [auth K]50S ribosomal protein L14

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR002677Large ribosomal subunit protein bL32Family
A [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
A [auth 0]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
J [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
J [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
J [auth L]IPR030878Large ribosomal subunit protein uL15Family
J [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
J [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
K [auth N]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
K [auth N]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
K [auth N]IPR000456Large ribosomal subunit protein bL17Family
L [auth O]IPR005484Large ribosomal subunit protein uL18Family
L [auth O]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
M [auth P]IPR001857Large ribosomal subunit protein bL19Family
M [auth P]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
M [auth P]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
M [auth P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth Q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
N [auth Q]IPR005813Large ribosomal subunit protein bL20Family
O [auth R]IPR028909Large ribosomal subunit protein bL21-likeFamily
O [auth R]IPR001787Large ribosomal subunit protein bL21Family
O [auth R]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
O [auth R]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
P [auth S]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
P [auth S]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
P [auth S]IPR001063Large ribosomal subunit protein uL22Family
P [auth S]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
P [auth S]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
Q [auth U]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Q [auth U]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth U]IPR003256Large ribosomal subunit protein uL24Family
Q [auth U]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Q [auth U]IPR005824KOWDomain
Q [auth U]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
R [auth V]IPR020055Ribosomal protein bL25, short-formFamily
R [auth V]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
R [auth V]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
R [auth V]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
S [auth W]IPR001684Large ribosomal subunit protein bL27Family
S [auth W]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
B [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
B [auth 2]IPR000271Large ribosomal subunit protein bL34Family
T [auth Y]IPR001854Large ribosomal subunit protein uL29Family
T [auth Y]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
T [auth Y]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
U [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
U [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
U [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
U [auth Z]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
E [auth D]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth D]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
E [auth D]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth D]IPR000597Large ribosomal subunit protein uL3Family
F [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
F [auth E]IPR002136Large ribosomal subunit protein uL4Family
F [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
G [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
G [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
G [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
G [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
G [auth F]IPR002132Large ribosomal subunit protein uL5Family
H [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
H [auth J]IPR005822Large ribosomal subunit protein uL13Family
H [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
H [auth J]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
I [auth K]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
I [auth K]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
I [auth K]IPR000218Large ribosomal subunit protein uL14Family
I [auth K]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site