8BYL | pdb_00008byl

Cryo-EM structure of SKP1-SKP2-CKS1 from the SCFSKP2 E3 ligase complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyCell cycle regulatory proteins 8037340 3000311 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRNI-like 8037339 3000990 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyF-box domain 8038678 3000567 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPOZ domain 8035033 3000894 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySkp1 dimerisation domain-like 8038683 3000564 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01111Cyclin-dependent kinase regulatory subunit (CKS)Cyclin-dependent kinase regulatory subunitDomain
PF12937F-box-like (F-box-like)F-box-likeThis is an F-box-like family. Domain
PF01466Skp1 family, dimerisation domain (Skp1)Skp1 family, dimerisation domainDomain
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Cyclin-dependent kinase inhibitor 1B
Cyclin-dependent kinases regulatory subunit 1
S-phase kinase-associated protein 2
S-phase kinase-associated protein 1

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP46527
PharosP61024
PharosQ13309
PharosP63208

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
TPO Parent Component: THR

RESIDAA0038

PSI-MOD :  O-phospho-L-threonine MOD:00047