Crystal structure of CnaB2 domain from Lactobacillus plantarum
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | SdrD_B_1 | e8bdwA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| B | SdrD_B_1 | e8bdwB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| C | SdrD_B_1 | e8bdwC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| D | SdrD_B_1 | e8bdwD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| E | SdrD_B_1 | e8bdwE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| F | SdrD_B_1 | e8bdwF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| G | SdrD_B_1 | e8bdwG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| H | SdrD_B_1 | e8bdwH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| I | SdrD_B_1 | e8bdwI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| J | SdrD_B_1 | e8bdwJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| K | SdrD_B_1 | e8bdwK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
| L | SdrD_B_1 | e8bdwL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: SdrD_B_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17802 | Prealbumin-like fold domain (SpaA) | Prealbumin-like fold domain | This entry contains a prealbumin-like domain from a wide variety of bacterial surface proteins. This entry corresponds to domain 1 and domain 3 of SpaA from Corynebacterium diphtheriae [1]. Some members of this family contain an isopeptide bond.ED A0 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Cell surface adherence protein,collagen-binding domain, LPXTG-motif cell wall anchor | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR041033 | SpaA-like, prealbumin fold domain subgroup 1 | Domain | |
| IPR008966 | Adhesion domain superfamily | Homologous Superfamily | |
| IPR011252 | Fibrogen-binding domain 1 | Homologous Superfamily | |
| IPR041171 | SDR-like Ig domain | Domain |














