8BDA

IFTA complex in anterograde intraflagellar transport trains (Chlamydomonas reinhardtii)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C]	PF12894	Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)	Anaphase-promoting complex subunit 4 WD40 domain	-	Repeat
B [auth E]	PF14559	Tetratricopeptide repeat (TPR_19)	Tetratricopeptide repeat	-	Repeat
B [auth E]	PF13181	Tetratricopeptide repeat (TPR_8)	Tetratricopeptide repeat	-	Repeat
B [auth E]	PF13174	Tetratricopeptide repeat (TPR_6)	Tetratricopeptide repeat	-	Repeat
C [auth G]	PF12894	Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)	Anaphase-promoting complex subunit 4 WD40 domain	-	Repeat
D [auth I]	PF15911	WD domain, G-beta repeat (WD40_3)	WD domain, G-beta repeat	-	Repeat
E [auth L]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	Intraflagellar transport protein 121	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly protein localization localization cellular localization protein localization to cilium protein localization to organelle cellular macromolecule localization macromolecule localization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle cell projection organelle cilium cellular anatomical entity motile cilium plasma membrane bounded cell projection non-motile cilium
B [auth E]	Intraflagellar transport protein 139	-	protein localization localization cellular localization protein localization to cilium protein localization to organelle cellular macromolecule localization macromolecule localization cellular process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process protein localization localization cellular localization protein localization to cilium protein localization to organelle cellular macromolecule localization macromolecule localization cellular process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process gene expression macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process metabolic process RNA processing macromolecule metabolic process plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization cellular component organization organelle organization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport	membrane-bounded organelle cell projection organelle cilium cellular anatomical entity plasma membrane bounded cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A
C [auth G]	Intraflagellar transport particle protein 140	-	cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium cellular anatomical entity cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cytoskeleton organelle intracellular non-membrane-bounded organelle cytoplasm non-membrane-bounded organelle ciliary basal body microtubule organizing center microtubule cytoskeleton
D [auth I]	Intraflagellar transport protein 144	-	cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport organelle assembly plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cell projection assembly	membrane-bounded organelle cell projection organelle cilium cellular anatomical entity plasma membrane bounded cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A motile cilium
E [auth L]	Intraflagellar transport protein 122 homolog	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly protein localization localization cellular localization protein localization to cilium protein localization to organelle cellular macromolecule localization macromolecule localization transport intracellular transport intraciliary retrograde transport establishment of localization protein-containing complex localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle cell projection organelle cilium cellular anatomical entity motile cilium plasma membrane bounded cell projection non-motile cilium

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C]	IPR017233	WD repeat protein 35	Family
A [auth C]	IPR039857	Intraflagellar transport protein 122/121 homolog	Family
A [auth C]	IPR024977	Anaphase-promoting complex subunit 4-like, WD40 domain	Domain
A [auth C]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A [auth C]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth C]	IPR001680	WD40 repeat	Repeat
A [auth C]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
B [auth E]	IPR003107	HAT (Half-A-TPR) repeat	Repeat
B [auth E]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B [auth E]	IPR019734	Tetratricopeptide repeat	Repeat
B [auth E]	IPR040364	Tetratricopeptide repeat protein 21A/21B	Family
C [auth G]	IPR001680	WD40 repeat	Repeat
C [auth G]	IPR024977	Anaphase-promoting complex subunit 4-like, WD40 domain	Domain
C [auth G]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C [auth G]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C [auth G]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
D [auth I]	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	Homologous Superfamily
D [auth I]	IPR039468	WDR19, WD40 repeat	Repeat
D [auth I]	IPR001680	WD40 repeat	Repeat
D [auth I]	IPR040379	WD repeat-containing protein 19/dyf-2	Family
D [auth I]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
D [auth I]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
E [auth L]	IPR001680	WD40 repeat	Repeat
E [auth L]	IPR039857	Intraflagellar transport protein 122/121 homolog	Family
E [auth L]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
E [auth L]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
E [auth L]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

Prepare Data

Validate Data

Deposit Data

Help and Resources

8BDA

IFTA complex in anterograde intraflagellar transport trains (Chlamydomonas reinhardtii)

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage