8BDA | pdb_00008bda

IFTA complex in anterograde intraflagellar transport trains (Chlamydomonas reinhardtii)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E [auth L]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
D [auth I]	PF15911	WDR19 second beta-propeller (Beta-prop_WDR19_2nd)	WDR19 second beta-propeller	-	Repeat
C [auth G]	PF12894	Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)	Anaphase-promoting complex subunit 4 WD40 domain	-	Repeat
B [auth E]	PF14559	Tetratricopeptide repeat (TPR_19)	Tetratricopeptide repeat	-	Repeat
B [auth E]	PF13181	Tetratricopeptide repeat (TPR_8)	Tetratricopeptide repeat	-	Repeat
B [auth E]	PF13174	Tetratricopeptide repeat (TPR_6)	Tetratricopeptide repeat	-	Repeat
B [auth E]	PF13432	Tetratricopeptide repeat (TPR_16)	Tetratricopeptide repeat	-	Repeat
A [auth C]	PF12894	Anaphase-promoting complex subunit 4 WD40 domain (ANAPC4_WD40)	Anaphase-promoting complex subunit 4 WD40 domain	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth L]	Intraflagellar transport protein 122 homolog	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization cellular localization transport intracellular transport intraciliary retrograde transport establishment of localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle cell projection cellular anatomical structure organelle cilium motile cilium plasma membrane bounded cell projection non-motile cilium
D [auth I]	Intraflagellar transport protein 144	-	localization macromolecule localization intracellular protein localization cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization organelle organization establishment of localization in cell microtubule-based transport localization macromolecule localization intracellular protein localization cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport organelle assembly plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cell projection assembly	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A motile cilium
C [auth G]	Intraflagellar transport particle protein 140	-	cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization localization organelle organization establishment of localization in cell microtubule-based transport cellular process transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm ciliary basal body microtubule organizing center microtubule cytoskeleton
B [auth E]	Intraflagellar transport protein 139	-	localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process cellular localization plasma membrane bounded cell projection organization cell projection organization transport intracellular transport intraciliary retrograde transport establishment of localization cellular component organization organelle organization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cellular component organization or biogenesis cilium organization intraciliary transport	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection protein-containing complex intraciliary transport particle intraciliary transport particle A
A [auth C]	Intraflagellar transport protein 121	-	organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis non-motile cilium assembly cilium organization cell projection assembly localization protein localization to cilium protein localization to organelle macromolecule localization intracellular protein localization cellular localization transport intracellular transport intraciliary retrograde transport establishment of localization establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process intraciliary transport	protein-containing complex intraciliary transport particle intraciliary transport particle A intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle cytoplasm membrane-bounded organelle cell projection cilium protein-containing complex intraciliary transport particle intraciliary transport particle A intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle cytoplasm membrane-bounded organelle cell projection cilium motile cilium plasma membrane bounded cell projection non-motile cilium

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E [auth L]	IPR039857	Intraflagellar transport protein 122/121 homolog	Family
E [auth L]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
E [auth L]	IPR056153	IFT122, first beta-propeller domain	Domain
E [auth L]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
E [auth L]	IPR057411	Intraflagellar transport protein 122 homolog, TPR domain	Domain
E [auth L]	IPR001680	WD40 repeat	Repeat
E [auth L]	IPR056152	IFT122, second beta-propeller domain	Domain
E [auth L]	IPR056838	IFT122, zinc ribbon domain	Domain
E [auth L]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
D [auth I]	IPR039468	WDR19, WD40 repeat domain	Domain
D [auth I]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
D [auth I]	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	Homologous Superfamily
D [auth I]	IPR001680	WD40 repeat	Repeat
D [auth I]	IPR056168	IF140/IFT172/WDR19, TPR domain	Domain
D [auth I]	IPR040379	WD repeat-containing protein 19/dyf-2	Family
D [auth I]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C [auth G]	IPR001680	WD40 repeat	Repeat
C [auth G]	IPR056168	IF140/IFT172/WDR19, TPR domain	Domain
C [auth G]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
C [auth G]	IPR056156	IF140, C-terminal TPR domain	Domain
C [auth G]	IPR056154	IFT140, first beta-propeller domain	Domain
C [auth G]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C [auth G]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C [auth G]	IPR056155	IFT140, second beta-propeller domain	Domain
B [auth E]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
B [auth E]	IPR056833	Tetratricopeptide repeat protein 21A/21B, N-terminal ARM repeat	Domain
B [auth E]	IPR056835	Tetratricopeptide repeat protein 21A/21B, fifth ARM repeats domain	Domain
B [auth E]	IPR040364	Tetratricopeptide repeat protein 21A/21B	Family
B [auth E]	IPR056832	Tetratricopeptide repeat protein 21A/21B, second ARM domain	Domain
B [auth E]	IPR003107	HAT (Half-A-TPR) repeat	Repeat
B [auth E]	IPR056834	Tetratricopeptide repeat protein 21A/21B, C-terminal ARM domain	Domain
B [auth E]	IPR019734	Tetratricopeptide repeat	Repeat
B [auth E]	IPR056836	Tetratricopeptide repeat protein 21A/21B, fourth ARM domain	Domain
A [auth C]	IPR017233	WD repeat protein 35	Family
A [auth C]	IPR056158	IFT121, second beta-propeller domain	Domain
A [auth C]	IPR057361	WD repeat-containing protein 35, TPR repeats	Repeat
A [auth C]	IPR039857	Intraflagellar transport protein 122/121 homolog	Family
A [auth C]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A [auth C]	IPR056157	IFT80/172/WDR35, TPR domain	Domain
A [auth C]	IPR056170	IFT121-like, zinc finger domain	Domain
A [auth C]	IPR056159	IFT121/TULP4, N-terminal	Domain
A [auth C]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth C]	IPR001680	WD40 repeat	Repeat
A [auth C]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily