8BBO | pdb_00008bbo

SARS-CoV-2 Delta-RBD complexed with BA.2-36 Fab


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]F_UNCLASSIFIEDe8bboL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
B [auth H]F_UNCLASSIFIEDe8bboH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
A [auth R]F_UNCLASSIFIEDe8bboR1 A: a+b three layersX: Coronavirus spike protein receptor-binding domain (From Homology)H: Coronavirus spike protein receptor-binding domainT: Beta-coronavirus spike protein receptor-binding domainF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L]Light ChainIGKV1 Kappaspike glycoproteinSAbDab (2026-01-23)
B [auth H]Heavy ChainIGHV4 -spike glycoproteinSAbDab (2026-01-23)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth L]Immunoglobulin kappa light chain-
B [auth H]IGH@ protein-
A [auth R]Spike glycoprotein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth L]IPR003597Immunoglobulin C1-setDomain
C [auth L]IPR050150Immunoglobulin Variable Light ChainFamily
C [auth L]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth L]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
C [auth L]IPR013106Immunoglobulin V-set domainDomain
C [auth L]IPR003599Immunoglobulin domain subtypeDomain
C [auth L]IPR007110Immunoglobulin-like domainDomain
C [auth L]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B [auth H]IPR003597Immunoglobulin C1-setDomain
B [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth H]IPR013106Immunoglobulin V-set domainDomain
B [auth H]IPR003599Immunoglobulin domain subtypeDomain
B [auth H]IPR007110Immunoglobulin-like domainDomain
B [auth H]IPR050380Immune Recognition and Response ModulatorsFamily
B [auth H]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A [auth R]IPR018548Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirusDomain
A [auth R]IPR044341Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-likeDomain
A [auth R]IPR032500Spike glycoprotein S1, N-terminal domain, betacoronavirus-likeDomain
A [auth R]IPR042578Spike glycoprotein, betacoronavirusFamily
A [auth R]IPR036326Spike S1 subunit, receptor binding domain superfamily, betacoronavirusHomologous Superfamily
A [auth R]IPR043002Spike glycoprotein, N-terminal domain superfamilyHomologous Superfamily
A [auth R]IPR044874Spike glycoprotein S2, coronavirus, heptad repeat 2Domain
A [auth R]IPR044873Spike glycoprotein S2, coronavirus, heptad repeat 1Domain
A [auth R]IPR043473Spike glycoprotein S2 superfamily, coronavirusHomologous Superfamily
A [auth R]IPR043607Coronavirus spike glycoprotein S1, C-terminalDomain
A [auth R]IPR002552Spike glycoprotein S2, coronavirusDomain
A [auth R]IPR044366Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2Domain