8B2L | pdb_00008b2l

Cryo-EM structure of the plant 80S ribosome


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth G1]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
EC [auth B3]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
DC [auth A3]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
H [auth F1]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
G [auth E1]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
G [auth E1]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
JB [auth Z3]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
F [auth D1]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
HB [auth Y3]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e familyBovine L40 has been identified as a secondary RNA binding protein [1]. L40 is fused to a ubiquitin protein [2]. Domain
GB [auth X3]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
FB [auth W3]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
EB [auth V3]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
DB [auth U3]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
DB [auth U3]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
CB [auth T3]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
CB [auth T3]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
BB [auth S3]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
BB [auth S3]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
AB [auth R3]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
ZA [auth Q3]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
ZA [auth Q3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
ZA [auth Q3]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
YA [auth P3]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
E [auth C1]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
E [auth C1]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
XA [auth O3]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
XA [auth O3]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
WA [auth N3]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
WA [auth N3]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
VA [auth M3]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
VA [auth M3]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
VA [auth M3]PF00467KOW motif (KOW)KOW motif- Family
UA [auth L3]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
TA [auth K3]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
SA [auth J3]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
RA [auth I3]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
QA [auth H3]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
QA [auth H3]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PA [auth G3]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
PA [auth G3]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
OA [auth F3]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
OA [auth F3]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
NA [auth E3]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
NA [auth E3]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
MA [auth D3]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
MA [auth D3]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
LA [auth C3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
BA [auth Z1]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
AA [auth Y1]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
Z [auth X1]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
Z [auth X1]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
Y [auth W1]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
X [auth V1]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
W [auth U1]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
V [auth T1]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
U [auth S1]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
T [auth R1]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
S [auth Q1]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
R [auth P1]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
Q [auth O1]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
P [auth N1]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
O [auth M1]PF04758Ribosomal protein S30 (Ribosomal_S30)Ribosomal protein S30- Family
N [auth L1]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
M [auth K1]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
M [auth K1]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
J [auth H1]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
A [auth A1]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
A [auth A1]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
A [auth A1]PF07650KH domain (KH_2)KH domainDomain
A [auth A1]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
A [auth A1]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
A [auth A1]PF00467KOW motif (KOW)KOW motif- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth G1]40S ribosomal protein S21
EC [auth B3]5.8S rRNA---
DC [auth A3]25S rRNA---
CC [auth l3]nascent chain---
H [auth F1]40S ribosomal protein S3a
BC [auth u3]uL6 (60S ribosomal protein L9)
AC [auth t3]uL5 (60S ribosomal protein L11)
ZB [auth s3]uL4 (60S ribosomal protein L4)
YB [auth r3]uL3 (60S ribosomal protein L3)
XB [auth q3]60S ribosomal protein L7-4-like
WB [auth o3]uL2 (60S ribosomal protein L8)
VB [auth n3]60S ribosomal protein L35-like
UB [auth m3]uL24 (60S ribosomal protein L26)
TB [auth k3]60S ribosomal protein L23a
SB [auth j3]50S ribosomal protein L22, chloroplastic
G [auth E1]40S ribosomal protein S19-3
RB [auth h3]60S ribosomal protein L5-like
QB [auth g3]uL16 (60S ribosomal protein L10)
PB [auth f3]uL15 (60S ribosomal protein L27a)
OB [auth e3]60S ribosomal protein L23
NB [auth d3]uL13 (60S ribosomal protein L13a)
MB [auth c3]60S ribosomal protein L7a
LB [auth b3]eL6 (60S ribosomal protein L6)
KB [auth a3]60S ribosomal protein L37a
JB [auth Z3]60S ribosomal protein L44
IB [auth p3]60S ribosomal protein L41
F [auth D1]40S ribosomal protein S17-like
HB [auth Y3]ubiquitin-60S ribosomal protein L40
GB [auth X3]60S ribosomal protein L39-3
FB [auth W3]60S ribosomal protein L38
EB [auth V3]Ribosomal protein L37
DB [auth U3]eL36 (60S ribosomal protein L36)
CB [auth T3]60S ribosomal protein L34
BB [auth S3]eL33 (60S ribosomal protein L35a)
AB [auth R3]60S ribosomal protein L32-1
ZA [auth Q3]eL31 (60S ribosomal protein L31)
YA [auth P3]60S ribosomal protein L30-like -
E [auth C1]40S ribosomal protein S12
XA [auth O3]60S ribosomal protein L29
WA [auth N3]eL28 (60S ribosomal protein L28)
VA [auth M3]eL27 (60S ribosomal protein L27)
UA [auth L3]60S ribosomal protein L24-like
TA [auth K3]60S ribosomal protein L22-2-like
SA [auth J3]60S ribosomal protein L21-1-like
RA [auth I3]60S ribosomal protein L18a
QA [auth H3]Ribosomal protein L19
PA [auth G3]60S ribosomal protein L18-2-like
OA [auth F3]Ribosomal protein L15
D [auth l1]40S ribosomal protein S10-1-like -
NA [auth E3]60S ribosomal protein L14-1
MA [auth D3]60S ribosomal protein L13
LA [auth C3]5S rRNA---
JA [auth i2],
KA [auth W2]
tRNA---
IA [auth B1]mRNA---
HA [auth f1]40S ribosomal protein S16
GA [auth e1]40S ribosomal protein S15a-1
FA [auth d1]40S ribosomal protein S5-like
EA [auth c1]40S ribosomal protein S2-3-like
DA [auth b1]40S ribosomal protein S9-2-like
C [auth h1]18S rRNA---
CA [auth a1]40S ribosomal protein S3-2-like
BA [auth Z1]40S ribosomal protein SA
AA [auth Y1]40S ribosomal protein S15-like
Z [auth X1]40S ribosomal protein S11-like
Y [auth W1]30S ribosomal protein S15, chloroplastic
X [auth V1]40S ribosomal protein S29
W [auth U1]40S ribosomal protein S18
V [auth T1]40S ribosomal protein S23
U [auth S1]40S ribosomal protein S14-2
T [auth R1]40S ribosomal protein S20-2
B [auth k1]40S ribosomal protein S6
S [auth Q1]guanine nucleotide-binding protein subunit beta-like protein
R [auth P1]40S ribosomal protein S8
Q [auth O1]40S ribosomal protein S7
P [auth N1]ubiquitin-40S ribosomal protein S27a-like
O [auth M1]40S ribosomal protein S30
N [auth L1]40S ribosomal protein S28
M [auth K1]40S ribosomal protein S27
L [auth J1]40S ribosomal protein S26
K [auth I1]40S ribosomal protein S25 -
J [auth H1]40S ribosomal protein S24
A [auth A1]40S ribosomal protein S4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth G1]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
I [auth G1]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
I [auth G1]IPR001931Small ribosomal subunit protein eS21Family
H [auth F1]IPR001593Small ribosomal subunit protein eS1Family
H [auth F1]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
H [auth F1]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
BC [auth u3]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
BC [auth u3]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
BC [auth u3]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
BC [auth u3]IPR000702Large ribosomal subunit protein uL6-likeFamily
AC [auth t3]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
AC [auth t3]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
AC [auth t3]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
AC [auth t3]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
AC [auth t3]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
AC [auth t3]IPR002132Large ribosomal subunit protein uL5Family
ZB [auth s3]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
ZB [auth s3]IPR002136Large ribosomal subunit protein uL4Family
ZB [auth s3]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
ZB [auth s3]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
ZB [auth s3]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
YB [auth r3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
YB [auth r3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
YB [auth r3]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
YB [auth r3]IPR000597Large ribosomal subunit protein uL3Family
YB [auth r3]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
XB [auth q3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
XB [auth q3]IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
XB [auth q3]IPR039699Large ribosomal subunit protein uL30Family
XB [auth q3]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
XB [auth q3]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
XB [auth q3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
XB [auth q3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
WB [auth o3]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
WB [auth o3]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
WB [auth o3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WB [auth o3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WB [auth o3]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
WB [auth o3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
WB [auth o3]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
WB [auth o3]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
WB [auth o3]IPR002171Large ribosomal subunit protein uL2Family
VB [auth n3]IPR001854Large ribosomal subunit protein uL29Family
VB [auth n3]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
VB [auth n3]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
UB [auth m3]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
UB [auth m3]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
UB [auth m3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UB [auth m3]IPR005824KOWDomain
UB [auth m3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UB [auth m3]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
TB [auth k3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
TB [auth k3]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
TB [auth k3]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
TB [auth k3]IPR019985Large ribosomal subunit protein uL23Family
TB [auth k3]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
TB [auth k3]IPR013025Large ribosomal subunit protein uL23-likeFamily
SB [auth j3]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
SB [auth j3]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
SB [auth j3]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
SB [auth j3]IPR001063Large ribosomal subunit protein uL22Family
G [auth E1]IPR001266Small ribosomal subunit protein eS19Family
G [auth E1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
G [auth E1]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
G [auth E1]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
RB [auth h3]IPR057268Large ribosomal subunit protein uL18Family
RB [auth h3]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
RB [auth h3]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
QB [auth g3]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
QB [auth g3]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
QB [auth g3]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
QB [auth g3]IPR016180Large ribosomal subunit protein uL16 domainDomain
QB [auth g3]IPR047873Large ribosomal subunit protein uL16Family
PB [auth f3]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PB [auth f3]IPR030878Large ribosomal subunit protein uL15Family
PB [auth f3]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
PB [auth f3]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
OB [auth e3]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
OB [auth e3]IPR000218Large ribosomal subunit protein uL14Family
OB [auth e3]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
NB [auth d3]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
NB [auth d3]IPR005822Large ribosomal subunit protein uL13Family
NB [auth d3]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
NB [auth d3]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
MB [auth c3]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
MB [auth c3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
MB [auth c3]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
MB [auth c3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MB [auth c3]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
MB [auth c3]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
LB [auth b3]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
LB [auth b3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
LB [auth b3]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
LB [auth b3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth b3]IPR000915Large ribosomal subunit protein eL6Family
KB [auth a3]IPR002674Large ribosomal subunit protein eL43Family
KB [auth a3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KB [auth a3]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
JB [auth Z3]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
JB [auth Z3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JB [auth Z3]IPR000552Large ribosomal subunit protein eL42Family
IB [auth p3]IPR007836Large ribosomal subunit protein eS32Family
F [auth D1]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
F [auth D1]IPR001210Small ribosomal subunit protein eS17Family
F [auth D1]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
HB [auth Y3]IPR019954Ubiquitin conserved siteConserved Site
HB [auth Y3]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
HB [auth Y3]IPR000626Ubiquitin-like domainDomain
HB [auth Y3]IPR019956Ubiquitin domainDomain
HB [auth Y3]IPR050158Ubiquitin and ubiquitin-likeFamily
HB [auth Y3]IPR001975Large ribosomal subunit protein eL40 domainDomain
HB [auth Y3]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
HB [auth Y3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GB [auth X3]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
GB [auth X3]IPR000077Large ribosomal subunit protein eL39Family
GB [auth X3]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
FB [auth W3]IPR002675Large ribosomal subunit protein eL38Family
FB [auth W3]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
EB [auth V3]IPR001569Large ribosomal subunit protein eL37Family
EB [auth V3]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
EB [auth V3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EB [auth V3]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
DB [auth U3]IPR000509Large ribosomal subunit protein eL36Family
DB [auth U3]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
CB [auth T3]IPR008195Large ribosomal subunit protein eL34Family
CB [auth T3]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
CB [auth T3]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
BB [auth S3]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
BB [auth S3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BB [auth S3]IPR001780Large ribosomal subunit protein eL33Family
BB [auth S3]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
AB [auth R3]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
AB [auth R3]IPR001515Large ribosomal subunit protein eL32Family
AB [auth R3]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
ZA [auth Q3]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
ZA [auth Q3]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
ZA [auth Q3]IPR000054Large ribosomal subunit protein eL31Family
YA [auth P3]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
YA [auth P3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
YA [auth P3]IPR039109Large ribosomal subunit protein eL30-likeFamily
YA [auth P3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
E [auth C1]IPR000530Small ribosomal subunit protein eS12Family
E [auth C1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
E [auth C1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
E [auth C1]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
XA [auth O3]IPR002673Large ribosomal subunit protein eL29Family
WA [auth N3]IPR029004Ribosomal eL28/Mak16Domain
WA [auth N3]IPR002672Large ribosomal subunit protein eL28Family
VA [auth M3]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
VA [auth M3]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
VA [auth M3]IPR005824KOWDomain
VA [auth M3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
VA [auth M3]IPR001141Large ribosomal subunit protein eL27Family
VA [auth M3]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
UA [auth L3]IPR011017TRASH domainDomain
UA [auth L3]IPR056366Large ribosomal subunit protein eL24Family
UA [auth L3]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
UA [auth L3]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
UA [auth L3]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
TA [auth K3]IPR002671Large ribosomal subunit protein eL22Family
TA [auth K3]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
SA [auth J3]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
SA [auth J3]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
SA [auth J3]IPR001147Large ribosomal subunit protein eL21Family
SA [auth J3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth I3]IPR028877Large ribosomal subunit protein eL20Family
RA [auth I3]IPR023573Large ribosomal subunit protein eL20 domainDomain
RA [auth I3]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
QA [auth H3]IPR039547Large ribosomal subunit protein eL19Family
QA [auth H3]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
QA [auth H3]IPR057260Ribosomal protein L19e, C-terminal domainDomain
QA [auth H3]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
QA [auth H3]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
QA [auth H3]IPR057259Ribosomal protein L19e, N-terminal domainDomain
QA [auth H3]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
QA [auth H3]IPR000196Large ribosomal subunit protein eL19 domainDomain
PA [auth G3]IPR021131Large ribosomal subunit protein uL15/eL18Domain
PA [auth G3]IPR000039Large ribosomal subunit protein eL18Family
PA [auth G3]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
OA [auth F3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OA [auth F3]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
OA [auth F3]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
OA [auth F3]IPR000439Large ribosomal subunit protein eL15Family
D [auth l1]IPR037447Small ribosomal subunit protein eS10Family
D [auth l1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
D [auth l1]IPR005326Plectin/eS10, N-terminalDomain
NA [auth E3]IPR039660Large ribosomal subunit protein eL14Family
NA [auth E3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
NA [auth E3]IPR002784Large ribosomal subunit protein eL14 domainDomain
NA [auth E3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth D3]IPR001380Large ribosomal subunit protein eL13Family
MA [auth D3]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
HA [auth f1]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
HA [auth f1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
HA [auth f1]IPR000754Small ribosomal subunit protein uS9Family
HA [auth f1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GA [auth e1]IPR000630Small ribosomal subunit protein uS8Family
GA [auth e1]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
GA [auth e1]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
FA [auth d1]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
FA [auth d1]IPR000235Small ribosomal subunit protein uS7Family
FA [auth d1]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
FA [auth d1]IPR023798Small ribosomal subunit protein uS7 domainDomain
FA [auth d1]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
EA [auth c1]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
EA [auth c1]IPR000851Small ribosomal subunit protein uS5Family
EA [auth c1]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
EA [auth c1]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
EA [auth c1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EA [auth c1]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
EA [auth c1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DA [auth b1]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DA [auth b1]IPR002942RNA-binding S4 domainDomain
DA [auth b1]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DA [auth b1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
DA [auth b1]IPR022801Small ribosomal subunit protein uS4Family
DA [auth b1]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
CA [auth a1]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
CA [auth a1]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CA [auth a1]IPR057258Small ribosomal subunit protein uS3Family
CA [auth a1]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth a1]IPR004044K Homology domain, type 2Domain
CA [auth a1]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CA [auth a1]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth a1]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
BA [auth Z1]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
BA [auth Z1]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
BA [auth Z1]IPR001865Small ribosomal subunit protein uS2Family
BA [auth Z1]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
BA [auth Z1]IPR027498Small ribosomal subunit protein uS2, eukaryotaFamily
AA [auth Y1]IPR002222Small ribosomal subunit protein uS19Family
AA [auth Y1]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AA [auth Y1]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
AA [auth Y1]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
Z [auth X1]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Z [auth X1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Z [auth X1]IPR000266Small ribosomal subunit protein uS17Family
Z [auth X1]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
Z [auth X1]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
Y [auth W1]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Y [auth W1]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Y [auth W1]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
Y [auth W1]IPR000589Small ribosomal subunit protein uS15Family
X [auth V1]IPR001209Small ribosomal subunit protein uS14Family
X [auth V1]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
X [auth V1]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
W [auth U1]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
W [auth U1]IPR001892Small ribosomal subunit protein uS13Family
W [auth U1]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
W [auth U1]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
V [auth T1]IPR006032Small ribosomal subunit protein uS12Family
V [auth T1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
V [auth T1]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
U [auth S1]IPR001971Small ribosomal subunit protein uS11Family
U [auth S1]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
U [auth S1]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
T [auth R1]IPR001848Small ribosomal subunit protein uS10Family
T [auth R1]IPR027486Small ribosomal subunit protein uS10 domainDomain
T [auth R1]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
T [auth R1]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
T [auth R1]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
B [auth k1]IPR014401Small ribosomal subunit protein eS6-likeFamily
B [auth k1]IPR001377Small ribosomal subunit protein eS6Family
B [auth k1]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
S [auth Q1]IPR019775WD40 repeat, conserved siteConserved Site
S [auth Q1]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
S [auth Q1]IPR045223Small ribosomal subunit protein RACK1-likeFamily
S [auth Q1]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
S [auth Q1]IPR001680WD40 repeatRepeat
S [auth Q1]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
R [auth P1]IPR001047Small ribosomal subunit protein eS8Family
R [auth P1]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
R [auth P1]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
R [auth P1]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
Q [auth O1]IPR000554Small ribosomal subunit protein eS7Family
Q [auth O1]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
P [auth N1]IPR019954Ubiquitin conserved siteConserved Site
P [auth N1]IPR000626Ubiquitin-like domainDomain
P [auth N1]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
P [auth N1]IPR002906Small ribosomal subunit protein eS31Domain
P [auth N1]IPR019956Ubiquitin domainDomain
P [auth N1]IPR050158Ubiquitin and ubiquitin-likeFamily
P [auth N1]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
P [auth N1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
O [auth M1]IPR006846Small ribosomal subunit protein eS30Family
N [auth L1]IPR028626Ribosomal protein eS28 conserved siteConserved Site
N [auth L1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth L1]IPR000289Small ribosomal subunit protein eS28Family
M [auth K1]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
M [auth K1]IPR000592Small ribosomal subunit protein eS27Family
M [auth K1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
L [auth J1]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
L [auth J1]IPR000892Small ribosomal subunit protein eS26Family
L [auth J1]IPR047864Ribosomal protein eS26, conserved siteConserved Site
K [auth I1]IPR004977Small ribosomal subunit protein eS25Family
J [auth H1]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
J [auth H1]IPR001976Small ribosomal subunit protein eS24Family
J [auth H1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
J [auth H1]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
A [auth A1]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
A [auth A1]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
A [auth A1]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
A [auth A1]IPR002942RNA-binding S4 domainDomain
A [auth A1]IPR013845Small ribosomal subunit protein eS4, central regionDomain
A [auth A1]IPR000876Small ribosomal subunit protein eS4Family
A [auth A1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
A [auth A1]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
A [auth A1]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
A [auth A1]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
A [auth A1]IPR005824KOWDomain