Resting state GluA1/A2 AMPA receptor in complex with TARP gamma 8 and ligand LY3130481
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth J] | SCOP2B Superfamily | Claudin-like | 8094098 | 3002606 | SCOP2B (2022-06-29) |
| B [auth I] | SCOP2B Superfamily | Claudin-like | 8094098 | 3002606 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8036483 | 3000083 | SCOP2B (2022-06-29) |
| A [auth B] | SCOP2B Superfamily | Type 2 solute binding protein-like | 8036483 | 3000083 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth A] | HTH_7 | e8aynA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
| E [auth C] | HTH_7 | e8aynC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
| C [auth J] | HTH_7 | e8aynJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
| B [auth I] | HTH_7 | e8aynI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
| D | HTH_7 | e8aynD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
| A [auth B] | HTH_7 | e8aynB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: HTH_7 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth J] | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (utative) |
| B [auth I] | 1.20.140.150 | Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A | domain 3 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| E [auth C], F [auth A] | PF00060 | Ligand-gated ion channel (Lig_chan) | Ligand-gated ion channel | - | Family |
| E [auth C], F [auth A] | PF10613 | Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd) | Ligated ion channel L-glutamate- and glycine-binding site | This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ... | Domain |
| B [auth I], C [auth J] | PF00822 | PMP-22/EMP/MP20/Claudin family (PMP22_Claudin) | PMP-22/EMP/MP20/Claudin family | - | Family |
| A [auth B], D | PF00060 | Ligand-gated ion channel (Lig_chan) | Ligand-gated ion channel | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Glutamate-gated Ion Channel (GIC) family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














