8AXK | pdb_00008axk

Type 3 secretion system export apparatus core, inner rod and needle of Shigella flexneri

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AB [auth o]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
BB [auth p]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
CB [auth q]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
DB [auth r]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
EB [auth s]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
FB [auth t]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
GB [auth u]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
HB [auth v]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
IB [auth w]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
MA [auth a]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
NA [auth b]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
OA [auth c]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
PA [auth d]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
R [auth S]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
RA [auth f]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
SA [auth g]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
T [auth U]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
TA [auth h]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
U [auth V]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
UA [auth i]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
V [auth W]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
VA [auth j]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
WA [auth k]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
XA [auth l]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
YA [auth m]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
ZA [auth n]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
S [auth T]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
QA [auth e]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M [auth N]	T3SS_needle_F	e8axkN1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
N [auth O]	T3SS_needle_F	e8axkO1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
O [auth P]	T3SS_needle_F	e8axkP1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
P [auth Q]	T3SS_needle_F	e8axkQ1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
Q [auth R]	T3SS_needle_F	e8axkR1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
AB [auth o]	T3SS_needle_F	e8axko1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
BB [auth p]	T3SS_needle_F	e8axkp1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
CB [auth q]	T3SS_needle_F	e8axkq1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
DB [auth r]	T3SS_needle_F	e8axkr1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
EB [auth s]	T3SS_needle_F	e8axks1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
FB [auth t]	T3SS_needle_F	e8axkt1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
GB [auth u]	T3SS_needle_F	e8axku1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
HB [auth v]	T3SS_needle_F	e8axkv1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
IB [auth w]	T3SS_needle_F	e8axkw1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
MA [auth a]	T3SS_needle_F	e8axka1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
NA [auth b]	T3SS_needle_F	e8axkb1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
OA [auth c]	T3SS_needle_F	e8axkc1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
PA [auth d]	T3SS_needle_F	e8axkd1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
R [auth S]	T3SS_needle_F	e8axkS1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
RA [auth f]	T3SS_needle_F	e8axkf1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
SA [auth g]	T3SS_needle_F	e8axkg1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
T [auth U]	T3SS_needle_F	e8axkU1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
TA [auth h]	T3SS_needle_F	e8axkh1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
U [auth V]	T3SS_needle_F	e8axkV1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
UA [auth i]	T3SS_needle_F	e8axki1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
V [auth W]	T3SS_needle_F	e8axkW1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
VA [auth j]	T3SS_needle_F	e8axkj1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
WA [auth k]	T3SS_needle_F	e8axkk1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
XA [auth l]	T3SS_needle_F	e8axkl1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
YA [auth m]	T3SS_needle_F	e8axkm1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
ZA [auth n]	T3SS_needle_F	e8axkn1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
S [auth T]	T3SS_needle_F	e8axkT1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
QA [auth e]	T3SS_needle_F	e8axke1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: T3SS_needle_F	ECOD (1.6)
AA [auth 2]	F_UNCLASSIFIED	e8axk21	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
BA [auth 4]	F_UNCLASSIFIED	e8axk41	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
CA [auth 6]	F_UNCLASSIFIED	e8axk61	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
DA [auth 8]	F_UNCLASSIFIED	e8axk81	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
EA [auth x]	F_UNCLASSIFIED	e8axkx1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
GA [auth z]	F_UNCLASSIFIED	e8axkz1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
HA [auth 1]	F_UNCLASSIFIED	e8axk11	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
IA [auth 3]	F_UNCLASSIFIED	e8axk31	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
JA [auth 5]	F_UNCLASSIFIED	e8axk51	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
KA [auth 7]	F_UNCLASSIFIED	e8axk71	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
LA [auth 9]	F_UNCLASSIFIED	e8axk91	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
W [auth X]	F_UNCLASSIFIED	e8axkX1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
X [auth Y]	F_UNCLASSIFIED	e8axkY1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
Y [auth Z]	F_UNCLASSIFIED	e8axkZ1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
Z [auth 0]	F_UNCLASSIFIED	e8axk01	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)
FA [auth y]	F_UNCLASSIFIED	e8axky1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF00813	FliP family (FliP)	FliP family	-	Family
A, B, C, D, E	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
K	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R]	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	PF03958	Bacterial type II/III secretion system short domain (Secretin_N)	Bacterial type II/III secretion system short domain	This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.	Domain
G, H, I, J	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
G, H, I, J	PF01313	Bacterial export proteins, family 3 (Bac_export_3)	Bacterial export proteins, family 3	-	Family
F	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
F	PF01311	Bacterial export proteins, family 1 (Bac_export_1)	Bacterial export proteins, family 1	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Surface presentation of antigens protein SpaP	-	establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
K	Surface presentation of antigens protein SpaS	-	establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R]	Protein MxiI	-	localization establishment of protein localization nitrogen compound transport protein transport transport macromolecule localization intracellular protein localization establishment of localization	-
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	Protein MxiH	identical protein binding protein binding binding	establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization	cell surface cellular anatomical structure extracellular region protein-containing complex type III protein secretion system complex
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	Lipoprotein MxiJ	-	establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	Outer membrane protein MxiD	-	establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport establishment of protein localization nitrogen compound transport transport secretion protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization	protein-containing complex type II protein secretion system complex type III protein secretion system complex cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane
G, H, I, J	Surface presentation of antigens protein SpaQ	-	establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process establishment of protein localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
F	Surface presentation of antigens protein SpaR	-	localization establishment of protein localization protein targeting establishment of localization	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR005838	Type III secretion system inner membrane P protein	Family
A, B, C, D, E	IPR005773	Type III secretion system, Yop virulence translocation protein R-like	Family
K	IPR006135	Type III secretion system substrate exporter	Family
K	IPR006307	Type III exporter system, secretion apparatus protein BsaZ-like	Family
K	IPR029025	Type III secretion system substrate exporter, C-terminal	Homologous Superfamily
L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R]	IPR047754	T3SS inner rod subunit SctI-like	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR037203	Type III secretion, needle-protein-like superfamily	Homologous Superfamily
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR021123	Type III secretion, needle-protein-like	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR011841	Type III secretion system, needle protein	Family
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	Homologous Superfamily
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR006182	Flagellar M-ring, N-terminal	Domain
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR003282	Type III secretion system lipoprotein SctJ	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR050810	Bacterial Secretion System Channel Protein	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR005644	NolW-like	Domain
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR004846	Type II/III secretion system, secretin-like domain	Domain
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR038591	NolW-like superfamily	Homologous Superfamily
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR004845	Type II secretion system protein GspD, conserved site	Conserved Site
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR049034	SPI-1 type 3 secretion system secretin, N0 domain	Domain
G, H, I, J	IPR006306	Type III secretion protein HrpO	Family
G, H, I, J	IPR002191	Bacterial export protein family 3	Family
F	IPR002010	Type III secretion system inner membrane R protein	Family
F	IPR006304	Type III secretion protein SpaR/YscT	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, AA [auth 2], AC [auth r0], B, BA [auth 4] A, AA [auth 2], AC [auth r0], B, BA [auth 4], BC [auth s0], C, CA [auth 6], CC [auth t0], D, DA [auth 8], DC [auth u0], E, EA [auth x], EC [auth v0], F, FA [auth y], FC [auth w0], G, GA [auth z], GC [auth x0], H, HA [auth 1], I, IA [auth 3], J, JA [auth 5], JB [auth a0], K, KA [auth 7], KB [auth b0], LA [auth 9], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], W [auth X], WB [auth n0], X [auth Y], XB [auth o0], Y [auth Z], YB [auth p0], Z [auth 0], ZB [auth q0]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type III Secretion Systems	Type III secretion system (T3SS): Export apparatus core, inner rod and needle