8AXK

Type 3 secretion system export apparatus core, inner rod and needle of Shigella flexneri

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
AB [auth o]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
BB [auth p]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
CB [auth q]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
DB [auth r]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
EB [auth s]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
FB [auth t]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
GB [auth u]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
HB [auth v]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
IB [auth w]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
MA [auth a]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
NA [auth b]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
OA [auth c]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
PA [auth d]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
R [auth S]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
RA [auth f]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
S [auth T]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
SA [auth g]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
T [auth U]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
TA [auth h]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
U [auth V]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
UA [auth i]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
V [auth W]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
VA [auth j]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
WA [auth k]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
XA [auth l]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
YA [auth m]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
ZA [auth n]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)
QA [auth e]	SCOP2B Superfamily	Type III secretion system needle-like	8038584	3000649	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M [auth N]	F_UNCLASSIFIED	e8axkN1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: F_UNCLASSIFIED	ECOD (1.6)
N [auth O]	F_UNCLASSIFIED	e8axkO1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: F_UNCLASSIFIED	ECOD (1.6)
O [auth P]	F_UNCLASSIFIED	e8axkP1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: F_UNCLASSIFIED	ECOD (1.6)
P [auth Q]	F_UNCLASSIFIED	e8axkQ1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: F_UNCLASSIFIED	ECOD (1.6)
Q [auth R]	F_UNCLASSIFIED	e8axkR1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: F_UNCLASSIFIED	ECOD (1.6)
AB [auth o]	PF09392	e8axko1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
BB [auth p]	PF09392	e8axkp1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
CB [auth q]	PF09392	e8axkq1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
DB [auth r]	PF09392	e8axkr1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
EB [auth s]	PF09392	e8axks1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
FB [auth t]	PF09392	e8axkt1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
GB [auth u]	PF09392	e8axku1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
HB [auth v]	PF09392	e8axkv1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
IB [auth w]	PF09392	e8axkw1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
MA [auth a]	PF09392	e8axka1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
NA [auth b]	PF09392	e8axkb1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
OA [auth c]	PF09392	e8axkc1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
PA [auth d]	PF09392	e8axkd1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
R [auth S]	PF09392	e8axkS1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
RA [auth f]	PF09392	e8axkf1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
S [auth T]	PF09392	e8axkT1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
SA [auth g]	PF09392	e8axkg1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
T [auth U]	PF09392	e8axkU1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
TA [auth h]	PF09392	e8axkh1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
U [auth V]	PF09392	e8axkV1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
UA [auth i]	PF09392	e8axki1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
V [auth W]	PF09392	e8axkW1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
VA [auth j]	PF09392	e8axkj1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
WA [auth k]	PF09392	e8axkk1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
XA [auth l]	PF09392	e8axkl1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
YA [auth m]	PF09392	e8axkm1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
ZA [auth n]	PF09392	e8axkn1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
QA [auth e]	PF09392	e8axke1	A: alpha bundles	X: Long alpha-hairpin	H: MxiH-like (From Topology)	T: MxiH-like	F: PF09392	ECOD (1.6)
AA [auth 2]	PF03958	e8axk21	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
BA [auth 4]	PF03958	e8axk41	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
CA [auth 6]	PF03958	e8axk61	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
DA [auth 8]	PF03958	e8axk81	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
EA [auth x]	PF03958	e8axkx1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
FA [auth y]	PF03958	e8axky1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
GA [auth z]	PF03958	e8axkz1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
HA [auth 1]	PF03958	e8axk11	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
IA [auth 3]	PF03958	e8axk31	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
JA [auth 5]	PF03958	e8axk51	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
KA [auth 7]	PF03958	e8axk71	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
LA [auth 9]	PF03958	e8axk91	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
W [auth X]	PF03958	e8axkX1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
X [auth Y]	PF03958	e8axkY1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
Y [auth Z]	PF03958	e8axkZ1	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)
Z [auth 0]	PF03958	e8axk01	A: a+b two layers	X: Alpha-lytic protease prodomain-like	H: Ring-building motif II in type III secretion system (From Topology)	T: Ring-building motif II in type III secretion system	F: PF03958	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
F	PF01311	Bacterial export proteins, family 1 (Bac_export_1)	Bacterial export proteins, family 1	-	Family
G, H, I, J	PF01313	Bacterial export proteins, family 3 (Bac_export_3)	Bacterial export proteins, family 3	-	Family
K	PF01312	FlhB HrpN YscU SpaS Family (Bac_export_2)	FlhB HrpN YscU SpaS Family	-	Family
A, B, C, D, E	PF00813	FliP family (FliP)	FliP family	-	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	PF09392	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F)	Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF	-	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	PF03958	Bacterial type II/III secretion system short domain (Secretin_N)	Bacterial type II/III secretion system short domain	This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.	Domain
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	PF01514	Secretory protein of YscJ/FliF family (YscJ_FliF)	Secretory protein of YscJ/FliF family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
F	Surface presentation of antigens protein SpaR	-	protein localization localization establishment of protein localization cellular localization protein targeting cellular macromolecule localization macromolecule localization cellular process establishment of localization	cell periphery plasma membrane membrane cellular anatomical entity
G, H, I, J	Surface presentation of antigens protein SpaQ	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery plasma membrane membrane cellular anatomical entity
K	Surface presentation of antigens protein SpaS	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery plasma membrane membrane cellular anatomical entity
A, B, C, D, E	Surface presentation of antigens protein SpaP	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery plasma membrane membrane cellular anatomical entity
L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R]	Protein MxiI	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport organic substance transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	-
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	Protein MxiH	identical protein binding protein binding binding	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport cellular macromolecule localization macromolecule localization cellular process	cell surface cellular anatomical entity extracellular region protein-containing complex type III protein secretion system complex
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	Outer membrane protein MxiD	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport protein secretion by the type III secretion system establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport cellular macromolecule localization macromolecule localization cellular process	protein-containing complex type III protein secretion system complex cell periphery cell outer membrane external encapsulating structure membrane cell envelope outer membrane cellular anatomical entity
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	Lipoprotein MxiJ	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion organic substance transport establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization cellular process	cell periphery cell outer membrane external encapsulating structure membrane cell envelope outer membrane cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
F	IPR002010	Type III secretion system inner membrane R protein	Family
F	IPR006304	Type III secretion protein SpaR/YscT	Family
G, H, I, J	IPR006306	Type III secretion protein HrpO	Family
G, H, I, J	IPR002191	Bacterial export protein family 3	Family
K	IPR006135	Type III secretion system substrate exporter	Family
K	IPR006307	Type III exporter system, secretion apparatus protein BsaZ-like	Family
K	IPR029025	Type III secretion system substrate exporter, C-terminal	Homologous Superfamily
A, B, C, D, E	IPR005838	Type III secretion system inner membrane P protein	Family
A, B, C, D, E	IPR005773	Type III secretion system, Yop virulence translocation protein R-like	Family
L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], L [auth M], M [auth N], N [auth O], O [auth P], P [auth Q], Q [auth R]	IPR047754	T3SS inner rod subunit SctI-like	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR037203	Type III secretion, needle-protein-like superfamily	Homologous Superfamily
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR021123	Type III secretion, needle-protein-like	Family
AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], AB [auth o], BB [auth p], CB [auth q], DB [auth r], EB [auth s], FB [auth t], GB [auth u], HB [auth v], IB [auth w], MA [auth a], NA [auth b], OA [auth c], PA [auth d], QA [auth e], R [auth S], RA [auth f], S [auth T], SA [auth g], T [auth U], TA [auth h], U [auth V], UA [auth i], V [auth W], VA [auth j], WA [auth k], XA [auth l], YA [auth m], ZA [auth n]	IPR011841	Type III secretion system, needle protein	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR005644	NolW-like	Domain
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR004846	Type II/III secretion system, secretin-like domain	Domain
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR038591	NolW-like superfamily	Homologous Superfamily
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR003522	Type III secretion system outer membrane pore YscC/HrcC	Family
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR004845	Type II secretion system protein GspD, conserved site	Conserved Site
AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], AA [auth 2], BA [auth 4], CA [auth 6], DA [auth 8], EA [auth x], FA [auth y], GA [auth z], HA [auth 1], IA [auth 3], JA [auth 5], KA [auth 7], LA [auth 9], W [auth X], X [auth Y], Y [auth Z], Z [auth 0]	IPR049034	SPI-1 type 3 secretion system secretin, N0 domain	Domain
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	Homologous Superfamily
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR003282	Type III secretion system lipoprotein HrcJ/YscJ	Family
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR006182	Flagellar M-ring , N-terminal	Domain
AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], AC [auth r0], BC [auth s0], CC [auth t0], DC [auth u0], EC [auth v0], FC [auth w0], GC [auth x0], JB [auth a0], KB [auth b0], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], WB [auth n0], XB [auth o0], YB [auth p0], ZB [auth q0]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, AA [auth 2], AC [auth r0], B, BA [auth 4] A, AA [auth 2], AC [auth r0], B, BA [auth 4], BC [auth s0], C, CA [auth 6], CC [auth t0], D, DA [auth 8], DC [auth u0], E, EA [auth x], EC [auth v0], F, FA [auth y], FC [auth w0], G, GA [auth z], GC [auth x0], H, HA [auth 1], I, IA [auth 3], J, JA [auth 5], JB [auth a0], K, KA [auth 7], KB [auth b0], LA [auth 9], LB [auth c0], MB [auth d0], NB [auth e0], OB [auth f0], PB [auth g0], QB [auth h0], RB [auth i0], SB [auth j0], TB [auth k0], UB [auth l0], VB [auth m0], W [auth X], WB [auth n0], X [auth Y], XB [auth o0], Y [auth Z], YB [auth p0], Z [auth 0], ZB [auth q0]	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Type III Secretion Systems	Type III secretion system (T3SS): Export apparatus core, inner rod and needle