8AVF | pdb_00008avf

Human leptin in complex with the human LEP-R ectodomain fused to a C-terminal trimeric isoleucine GCN4 zipper (closed 3:3 model)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B Superfamily4-helical cytokines 8037082 3001717 SCOP2B (2022-06-29)
CSCOP2B Superfamily4-helical cytokines 8037082 3001717 SCOP2B (2022-06-29)
ASCOP2B Superfamily4-helical cytokines 8037082 3001717 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FHTH_7e8avfF1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)
DHTH_7e8avfD1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)
BHTH_7e8avfB1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)
EHTH_7e8avfE1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)
CHTH_7e8avfC1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)
AHTH_7e8avfA1 A: a/b three-layered sandwichesX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HTH_7ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D, F
PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain
B, D, F
PF18589Obesity receptor immunoglobulin like domain (ObR_Ig)Obesity receptor immunoglobulin like domainThis is the immunoglobulin-like domain (IGD) found in obesity receptors (ObR). ObR is a single membrane-spanning receptor belonging to the class I cytokine receptor family. All isoforms have an identical extracellular part consisting of six domains: ...This is the immunoglobulin-like domain (IGD) found in obesity receptors (ObR). ObR is a single membrane-spanning receptor belonging to the class I cytokine receptor family. All isoforms have an identical extracellular part consisting of six domains: an N-terminal domain (NTD), two CRH domains (CRH1 and CRH2), an immunoglobulin-like domain (IGD), and two additional membrane-proximal fibronectin type III (FN III) domains. ObR activation depends on the CRH2, IGD, and FN III domains, however the CRH2 domain is the major leptin-binding determinant in the receptor. The IGD and membrane-proximal domains have no detectable affinity for the ligand, but are nonetheless indispensable for receptor activation. Deletion of the IGD results in a receptor with wild-type affinity for leptin, but completely devoid of biological activity [1-2].
Domain
B, D, F
PF06328Ig-like C2-type domain (Lep_receptor_Ig)Ig-like C2-type domainThis domain is a ligand-binding immunoglobulin-like domain [1]. The two cysteine residues form a disulphide bridge. Domain
A, C, E
PF02024Leptin (Leptin)LeptinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, D, F
Leptin receptor
A, C, E
Leptin

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B, D, F
PharosP48357
A, C, E
PharosP41159