8ASB

Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF15518	L protein N-terminus (L_protein_N)	L protein N-terminus	This endonuclease domain is found at the N-terminus of many bunyavirus L proteins [1].	Domain
A	PF04196	Bunyavirus RNA dependent RNA polymerase (Bunya_RdRp)	Bunyavirus RNA dependent RNA polymerase	-	Family
A	PF12603	RNA-directed RNA polymerase L, PA-C-like domain (L_PA-C-like)	RNA-directed RNA polymerase L, PA-C-like domain	This domain is found in RNA-directed RNA polymerase L from from Bunyavirales. It has been described as the PA-C-like domain which forms a narrow and positively charged cleft with the thumb domain, where the 3' RNA is likely bound [1]. It is found in ...	This domain is found in RNA-directed RNA polymerase L from from Bunyavirales. It has been described as the PA-C-like domain which forms a narrow and positively charged cleft with the thumb domain, where the 3' RNA is likely bound [1]. It is found in association with Pfam:PF04196.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	RNA-dependent RNA-polymerase L protein	5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity RNA-dependent RNA polymerase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups cation binding ion binding binding metal ion binding small molecule binding	cellular biosynthetic process cellular metabolic process RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process viral genome replication biosynthetic process cellular biosynthetic process cellular metabolic process RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process viral genome replication biosynthetic process viral RNA genome replication organic cyclic compound biosynthetic process viral process organic substance biosynthetic process metabolic process cellular process macromolecule metabolic process gene expression DNA-templated transcription	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum-Golgi intermediate compartment cytoplasm cellular anatomical entity intracellular membrane-bounded organelle host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell part membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum-Golgi intermediate compartment cytoplasm cellular anatomical entity intracellular membrane-bounded organelle host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell part host intracellular region host cell cytoplasm part host intracellular organelle host cell endoplasmic reticulum host cell Golgi apparatus
B [auth P]	RNA (5'-R(APCPAPCPAPGPAPGPAPCPGPCPCPCPAPGP*A)-3')	-	-	-
C [auth T]	RNA (5'-R(PUPCPUPGPGPGPCPGPGPUPCPUPUPUPGPUPGPU)-3')	-	-	-
D [auth G]	RNA (5'-R(PAPCP*A)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR007099	RNA-directed RNA polymerase, negative-strand RNA virus	Domain
A	IPR029124	RNA-directed RNA polymerase L, N-terminal	Domain
A	IPR022531	RNA-directed RNA polymerase L, PA-C-like domain	Domain
A	IPR007322	RNA-dependent RNA polymerase, bunyaviral	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.