8AP6 | pdb_00008ap6

Trypanosoma brucei mitochondrial F1Fo ATP synthase dimer


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
T [auth G2]F5_F8_type_Ce8ap6G21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
S [auth G1]F5_F8_type_Ce8ap6G11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
Q [auth F2]F5_F8_type_Ce8ap6F21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
P [auth F1]F5_F8_type_Ce8ap6F11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
N [auth E2]F5_F8_type_Ce8ap6E21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
M [auth E1]F5_F8_type_Ce8ap6E11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
K [auth D2]F5_F8_type_Ce8ap6D21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
J [auth D1]F5_F8_type_Ce8ap6D11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
ZA [auth S1]F5_F8_type_Ce8ap6S11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
YA [auth R2]F5_F8_type_Ce8ap6R21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
XA [auth R1]F5_F8_type_Ce8ap6R11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
VA [auth Q2]F5_F8_type_Ce8ap6Q21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
UA [auth Q1]F5_F8_type_Ce8ap6Q11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
SA [auth P2]F5_F8_type_Ce8ap6P21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
RA [auth P1]F5_F8_type_Ce8ap6P11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
PA [auth O2]F5_F8_type_Ce8ap6O21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
OA [auth O1]F5_F8_type_Ce8ap6O11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
KB [auth X2]F5_F8_type_Ce8ap6X21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
JB [auth X1]F5_F8_type_Ce8ap6X11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
IB [auth W2]F5_F8_type_Ce8ap6W21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
HB [auth W1]F5_F8_type_Ce8ap6W11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
GB [auth V2]F5_F8_type_Ce8ap6V21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
FB [auth V1]F5_F8_type_Ce8ap6V11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
EB [auth U2]F5_F8_type_Ce8ap6U21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
DB [auth U1]F5_F8_type_Ce8ap6U11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
CB [auth T2]F5_F8_type_Ce8ap6T21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
BB [auth T1]F5_F8_type_Ce8ap6T11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
AB [auth S2]F5_F8_type_Ce8ap6S21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
H [auth C2]F5_F8_type_Ce8ap6C21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
G [auth C1]F5_F8_type_Ce8ap6C11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
E [auth B2]F5_F8_type_Ce8ap6B21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
D [auth B1]F5_F8_type_Ce8ap6B11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
C [auth A2]F5_F8_type_Ce8ap6A21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
B [auth A1]F5_F8_type_Ce8ap6A11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
IA [auth L2]F5_F8_type_Ce8ap6L21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
HA [auth L1]F5_F8_type_Ce8ap6L11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
FA [auth K2]F5_F8_type_Ce8ap6K21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
EA [auth K1]F5_F8_type_Ce8ap6K11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
CA [auth J2]F5_F8_type_Ce8ap6J21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
BA [auth J1]F5_F8_type_Ce8ap6J11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
Z [auth I2]F5_F8_type_Ce8ap6I21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
Y [auth I1]F5_F8_type_Ce8ap6I11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
W [auth H2]F5_F8_type_Ce8ap6H21 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)
V [auth H1]F5_F8_type_Ce8ap6H11 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: F5_F8_type_CECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4]. Domain
KA [auth M1],
LA [auth M2]
PF00213ATP synthase delta (OSCP) subunit (OSCP)ATP synthase delta (OSCP) subunit- Family
V [auth H1],
W [auth H2]
PF02823ATP synthase, Delta/Epsilon chain, beta-sandwich domain (ATP-synt_DE_N)ATP synthase, Delta/Epsilon chain, beta-sandwich domainPart of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensit ...Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth E],
OB [auth e]
ATPTB1- -
QB [auth g],
R [auth G]
ATPTB3- - -
GA [auth L],
VB [auth l]
subunit-e- -
BC [auth r],
WA [auth R]
ATPEG4---
S [auth G1],
T [auth G2]
ATP synthase gamma subunit -
O [auth F],
PB [auth f]
subunit-f- -
ATP synthase subunit beta, mitochondrial
I [auth D],
NB [auth d]
subunit-d- -
F [auth C],
MB [auth c]
subunit-8- -
AC [auth q],
TA [auth Q]
ATPEG3- -
QA [auth P],
ZB [auth p]
subunit-b- - -
ATPase subunit 9, putative
NA [auth O],
YB [auth o]
ATPTB12- -
MA [auth N],
XB [auth n]
ATPTB11- -
ATP synthase subunit alpha, mitochondrial -
KA [auth M1],
LA [auth M2]
oligomycin sensitiviy conferring protein
JA [auth M],
WB [auth m]
subunit-g- - -
DA [auth K],
UB [auth k]
subunit-k- -
ATP synthase subunit p18, mitochondrial-
AA [auth J],
TB [auth j]
ATPTB6- - -
Y [auth I1],
Z [auth I2]
ATP synthase subunit epsilon, mitochondrial -
SB [auth i],
X [auth I]
subunit-i/j- -
V [auth H1],
W [auth H2]
ATP synthase, epsilon chain, putative
RB [auth h],
U [auth H]
ATPTB4- -
A,
LB [auth a]
ATP synthase subunit a-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
S [auth G1],
T [auth G2]
IPR000131ATP synthase, F1 complex, gamma subunitFamily
S [auth G1],
T [auth G2]
IPR035968ATP synthase, F1 complex, gamma subunit superfamilyHomologous Superfamily
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
IPR050053ATPase alpha/beta chainsFamily
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
IPR055190ATP synthase A/B type, C-terminal domainDomain
IPR003593AAA+ ATPase domainDomain
IPR005722ATP synthase, F1 complex, beta subunitFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR038662F1F0 ATP synthase subunit C superfamilyHomologous Superfamily
IPR020537ATP synthase, F0 complex, subunit C, DCCD-binding siteBinding Site
IPR000454ATP synthase, F0 complex, subunit CFamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
IPR005294ATP synthase, F1 complex, alpha subunitFamily
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
IPR000793ATP synthase, alpha subunit, C-terminalDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
KA [auth M1],
LA [auth M2]
IPR000711ATPase, OSCP/delta subunitFamily
KA [auth M1],
LA [auth M2]
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyHomologous Superfamily
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
Y [auth I1],
Z [auth I2]
IPR036742ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrialHomologous Superfamily
Y [auth I1],
Z [auth I2]
IPR006721ATP synthase, F1 complex, epsilon subunit, mitochondrialFamily
V [auth H1],
W [auth H2]
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalHomologous Superfamily
V [auth H1],
W [auth H2]
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalDomain
V [auth H1],
W [auth H2]
IPR001469ATP synthase, F1 complex, delta/epsilon subunitFamily