8AMZ | pdb_00008amz

Spinach 19S proteasome


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth T]e8amzT1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
H [auth S]e8amzS1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
G [auth V]e8amzV1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
F [auth M]e8amzM1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
E [auth L]e8amzL1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
D [auth K]e8amzK1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: V-setF:ECOD (20:10:01)
C [auth J]e8amzJ01 A: Rossmann-likeX: Rossmann-relatedH: FAD/NAD(P)-binding domainT: TPR_1, PPTA, TPR_7, TPR_16F:ECOD (20:10:01)
B [auth I]e8amzI01 A: Rossmann-likeX: Rossmann-relatedH: FAD/NAD(P)-binding domainT: TPR_1, PPTA, TPR_7, TPR_16F:ECOD (20:10:01)
Q [auth R]e8amzR1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
P [auth N]e8amzN1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
O [auth Z]e8amzZ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
N [auth P]e8amzP1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
M [auth Q]e8amzQ1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
L [auth U]e8amzU1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
K [auth O]e8amzO1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
J [auth W]e8amzW1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: CoV_S1_CF:ECOD (20:10:01)
A [auth H]e8amzH01 A: Rossmann-likeX: Rossmann-relatedH: FAD/NAD(P)-binding domainT: TPR_1, PPTA, TPR_7, TPR_16F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
I [auth T]1.25.40.990 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
H [auth S]1.25.40.570 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
G [auth V]3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)
E [auth L]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C [auth J]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C [auth J]1.10.8.60 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
Q [auth R]1.25.40.570 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
P [auth N]1.25.10.10 Mainly Alpha Alpha Horseshoe Leucine-rich Repeat Variant Leucine-rich Repeat VariantCATH (utative)
O [auth Z]1.25.10.10 Mainly Alpha Alpha Horseshoe Leucine-rich Repeat Variant Leucine-rich Repeat VariantCATH (utative)
N [auth P]1.25.40.570 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
M [auth Q]1.25.40.570 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
L [auth U]3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)
K [auth O]1.25.40.570 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (utative)
A [auth H]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth H]PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
A [auth H]PF2123626S proteasome regulatory subunit 7, OB domain (OB_PRS7)26S proteasome regulatory subunit 7, OB domainThis is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This doma ...This is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This domain mediates interactions with USP14 or Ubp6 [2,4].
Domain
A [auth H]PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth T]PCI domain-containing protein---
H [auth S]PCI domain-containing protein---
G [auth V]26S proteasome regulatory subunit RPN11---
F [auth M]AAA domain-containing protein---
E [auth L]AAA domain-containing protein---
D [auth K]AAA domain-containing protein---
C [auth J]AAA domain-containing protein---
B [auth I]AAA domain-containing protein---
Q [auth R]PCI domain-containing protein---
P [auth N]26S proteasome non-ATPase regulatory subunit 1 homolog---
O [auth Z]26S proteasome non-ATPase regulatory subunit 2 homolog---
N [auth P]PCI domain-containing protein---
M [auth Q]PCI domain-containing protein---
L [auth U]MPN domain-containing protein---
K [auth O]PCI domain-containing protein---
J [auth W]VWFA domain-containing protein---
A [auth H]26S proteasome regulatory subunit 7