8AJY | pdb_00008ajy

Ruminococcus flavefaciens Cohesin-Dockerin structure: dockerin from ScaH adaptor scaffoldin in complex with the cohesin from ScaE anchoring scaffoldin


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDockerin_IIIe8ajyD1 A: alpha arraysX: EF-handH: EF-hand-relatedT: Type I dockerin domainF: Dockerin_IIIECOD (1.6)
BDockerin_IIIe8ajyB1 A: alpha arraysX: EF-handH: EF-hand-relatedT: Type I dockerin domainF: Dockerin_IIIECOD (1.6)
CCohesine8ajyC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CohesinECOD (1.6)
ACohesine8ajyA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: CohesinECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D
PF00404Dockerin type I domain (Dockerin_1)Dockerin type I domainThe dockerin repeat is the binding partner of the cohesin domain Pfam:PF00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome [1]. The dockerin repeats, each bearing homology to the EF-hand calciu ...The dockerin repeat is the binding partner of the cohesin domain Pfam:PF00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome [1]. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium [2]. This family contains two copies of the repeat.
Domain

InterPro: Protein Family Classification InterPro Database Homepage