Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth J] | SCOP2B Superfamily | Subunit IX of photosystem I reaction centre, PsaJ | 8094723 | 3000824 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8094180 | 3000813 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Electron transport accessory proteins | 8094773 | 3000325 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Photosystem I subunit PsaD | 8095071 | 3000951 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8093860 | 3000020 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094499 | 3000850 | SCOP2B (2022-06-29) |
| X [auth 92] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8097194 | 3000343 | SCOP2B (2022-06-29) |
| T [auth 9] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8097194 | 3000343 | SCOP2B (2022-06-29) |
| S [auth 6] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099928 | 3000343 | SCOP2B (2022-06-29) |
| R [auth 5] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099932 | 3000343 | SCOP2B (2022-06-29) |
| Q [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099934 | 3000343 | SCOP2B (2022-06-29) |
| O [auth 8] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099930 | 3000343 | SCOP2B (2022-06-29) |
| N [auth 7] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8100068 | 3000343 | SCOP2B (2022-06-29) |
| P [auth Z] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| L [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8099102 | 3000343 | SCOP2B (2022-06-29) |
| J [auth L] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8097190 | 3000870 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094461 | 3000850 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth J] | e7zq9J1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| V [auth I2] | e7zq9I21 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| H [auth I] | e7zq9I1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| G | e7zq9G1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| F | e7zq9F1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| E | e7zq9E1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| D | e7zq9D1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| C | e7zq9C1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| U [auth B2] | WD40, ANAPC4_WD40, WD40_CDC20-Fz | e7zq9B201 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: WD40, ANAPC4_WD40, WD40_CDC20-Fz | ECOD (v294.1) |
| B | e7zq9B1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| X [auth 92] | e7zq9921 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| T [auth 9] | e7zq991 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| S [auth 6] | e7zq961 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| R [auth 5] | e7zq951 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| Q [auth 4] | e7zq941 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| O [auth 8] | e7zq981 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| N [auth 7] | e7zq971 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| M [auth 3] | e7zq931 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| P [auth Z] | e7zq9Z1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| L [auth 1] | e7zq911 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| K | e7zq9K1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| W [auth L2] | e7zq9L21 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| J [auth L] | e7zq9L1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) | |
| A | e7zq9A1 | A: a/b three-layered sandwiches | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth J] | PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family |
| H [auth I], V [auth I2] | PF00796 | Photosystem I reaction centre subunit VIII (PSI_8) | Photosystem I reaction centre subunit VIII | - | Family |
| PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain | |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family | |
| T [auth 9], X [auth 92] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| S [auth 6] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| R [auth 5] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| Q [auth 4] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| O [auth 8] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| N [auth 7] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| L [auth 1], P [auth Z] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Photosystem I |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystem+Light-Harvesting Complex Supercomplex | Photosystem I supercomplex, dimer |














