7WNR | pdb_00007wnr

Data-driven HADDOCK model of mycobacterial nMazE6-operator DNA complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth C]F_UNCLASSIFIEDe7wnrC1 A: alpha arraysX: HTHH: HTHT: Ribbon-helix-helixF: F_UNCLASSIFIEDECOD (1.6)
C [auth B]F_UNCLASSIFIEDe7wnrB1 A: alpha arraysX: HTHH: HTHT: Ribbon-helix-helixF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth B],
D [auth C]
PF01402Ribbon-helix-helix protein, copG family (RHH_1)Ribbon-helix-helix protein, copG familyThe structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement [2]. The helix-turn-helix-like structure is involved in dimerisation and not DNA b ...The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement [2]. The helix-turn-helix-like structure is involved in dimerisation and not DNA binding as might have been expected [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth B],
D [auth C]
Antitoxin MazE6 -
B [auth D]DNA (5'-D(P*TP*AP*CP*AP*GP*AP*TP*AP*GP*TP*AP*TP*AP*AP*CP*CP*GP*G)-3')---
DNA (5'-D(P*CP*CP*GP*GP*TP*TP*AP*TP*AP*CP*TP*AP*TP*CP*TP*GP*TP*A)-3')---