7UN6 | pdb_00007un6

Complex of UBE2O with NAP1L1


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CNAPe7un6C1 A: a+b two layersX: NAP-like (From Topology)H: NAP-like (From Topology)T: NAP-likeF: NAPECOD (1.6)
BNAPe7un6B1 A: a+b two layersX: NAP-like (From Topology)H: NAP-like (From Topology)T: NAP-likeF: NAPECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, C
PF00956Nucleosome assembly protein (NAP) (NAP)Nucleosome assembly protein (NAP)- Family
PF23048UBE2O, N-terminal SH3-A domain (SH3-A_UBE2O)UBE2O, N-terminal SH3-A domainThis domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, ...This domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, regulation of nuclear trafficking of chromatin-associated proteins and clearing ribosomes during erythropoiesis [1,2]. UBE2O is a multidomain protein composed of several SH3-like domains, UBC domain and a CR3 helix. The domain represented by this entry folds into an open beta-barrel with a typical SH3-like topology. This domain contains a large unstructured insertion that is rich with glycine residues.
Domain
PF23046UBE2O, tandem tSH3-B domain (tSH3-B_UBE2O)UBE2O, tandem tSH3-B domainThis domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, ...This domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, regulation of nuclear trafficking of chromatin-associated proteins and clearing ribosomes during erythropoiesis [1,2]. UBE2O is a multidomain protein composed of several SH3-like domains, UBC domain and a CR3 helix. The domain represented by this entry folds into two tandem intertwined beta-barrels each of which with typical SH3 topology [3]. This tandem SH3-like domain is involved in binding to NAP1L1, one of the major regulators of the UBE2O target selection [3].
Domain
PF23043UBE2O, SH3-B domain (SH3-B_UBE2O)UBE2O, SH3-B domainThis domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, ...This domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, regulation of nuclear trafficking of chromatin-associated proteins and clearing ribosomes during erythropoiesis [1,2]. UBE2O is a multidomain protein composed of several SH3-like domains, UBC domain and a CR3 helix. The domain represented by this entry folds into an open beta-barrel with typical SH3 topology. It precedes the ubiquitin binding SH3-like domain [3].
Domain
PF23044UBE2O, ubiquitin binding SH3-C domain (SH3-C_UBE2O)UBE2O, ubiquitin binding SH3-C domainThis domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, ...This domain is found in the human E3-independent E2 ubiquitin-conjugating enzyme UBE2O and related proteins. UBE2O is involved in the monoubiquitination of diverse targets to mediate important processes such as targeting proteins for quality control, regulation of nuclear trafficking of chromatin-associated proteins and clearing ribosomes during erythropoiesis [1,2]. UBE2O is a multidomain protein composed of several SH3-like domains, UBC domain and a CR3 helix. The domain represented by this entry folds into an open beta-barrel with typical SH3 topology. It binds ubiquitin via unique distinct interface and plays a key role in the UBE2O target selection [3].
Domain
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, C
Nucleosome assembly protein 1-like 1
(E3-independent) E2 ubiquitin-conjugating enzyme