7TZC

A drug and ATP binding site in type 1 ryanodine receptor

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth C]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
A [auth K]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyEF-hand8033438 3001983 SCOP2B (2022-06-29)
B [auth F]SCOP2B SuperfamilyRotamase-like8098876 3000622 SCOP2B (2022-06-29)
J [auth H]SCOP2B SuperfamilyRotamase-like8098876 3000622 SCOP2B (2022-06-29)
K [auth J]SCOP2B SuperfamilyRotamase-like8098876 3000622 SCOP2B (2022-06-29)
L [auth O]SCOP2B SuperfamilyRotamase-like8098876 3000622 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth C]PF00036e7tzcC2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
E [auth C]PF13499e7tzcC1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
A [auth K]PF00036e7tzcK2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
A [auth K]PF13499e7tzcK1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
C [auth D]PF00036e7tzcD2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
C [auth D]PF13499e7tzcD1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
D [auth E]PF00036e7tzcE1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF00036ECOD (1.6)
D [auth E]PF13499e7tzcE2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13499ECOD (1.6)
B [auth F]PF00254e7tzcF1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
J [auth H]PF00254e7tzcH1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
K [auth J]PF00254e7tzcJ1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)
L [auth O]PF00254e7tzcO1 A: a+b two layersX: FKBP-likeH: FKBP-likeT: FKBP-likeF: PF00254ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth K],
C [auth D],
D [auth E],
E [auth C]		PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pair- Domain
B [auth F],
J [auth H],
K [auth J],
L [auth O]		PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomerase- Domain
F [auth A],
G [auth B],
H [auth G],
I		PF00622SPRY domain (SPRY)SPRY domain- Family
F [auth A],
G [auth B],
H [auth G],
I		PF08454RyR and IP3R Homology associated (RIH_assoc)RyR and IP3R Homology associated- Repeat
F [auth A],
G [auth B],
H [auth G],
I		PF02815MIR domain (MIR)MIR domainThe MIR (protein mannosyltransferase, IP3R and RyR) domain is a domain that may have a ligand transferase function [1].Domain
F [auth A],
G [auth B],
H [auth G],
I		PF08709Inositol 1,4,5-trisphosphate/ryanodine receptor (Ins145_P3_rec)Inositol 1,4,5-trisphosphate/ryanodine receptorThis domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-ga ...This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum discriminate between different types of neuronal activity [1].
Domain
F [auth A],
G [auth B],
H [auth G],
I		PF21119Ryanodine receptor junctional solenoid repeat (RYDR_Jsol)Ryanodine receptor junctional solenoid repeatThis entry represents a region of the Ryanodine receptor composed of alpha helical ARM repeats [1]. This region has been termed the Junctional solenoid region (Jsol) [1].Domain
F [auth A],
G [auth B],
H [auth G],
I		PF01365RIH domain (RYDR_ITPR)RIH domain- Repeat
F [auth A],
G [auth B],
H [auth G],
I		PF02026RyR domain (RyR)RyR domain- Family
F [auth A],
G [auth B],
H [auth G],
I		PF00520Ion transport protein (Ion_trans)Ion transport protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth K],
C [auth D],
D [auth E],
E [auth C]		Calmodulin-1
B [auth F],
J [auth H],
K [auth J],
L [auth O]		Peptidyl-prolyl cis-trans isomerase FKBP1A
F [auth A],
G [auth B],
H [auth G],
I		Ryanodine receptor 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth K],
C [auth D],
D [auth E],
E [auth C]		IPR002048EF-hand domainDomain
A [auth K],
C [auth D],
D [auth E],
E [auth C]		IPR018247EF-Hand 1, calcium-binding siteBinding Site
A [auth K],
C [auth D],
D [auth E],
E [auth C]		IPR011992EF-hand domain pairHomologous Superfamily
B [auth F],
J [auth H],
K [auth J],
L [auth O]		IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyHomologous Superfamily
B [auth F],
J [auth H],
K [auth J],
L [auth O]		IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR036300Mir domain superfamilyHomologous Superfamily
F [auth A],
G [auth B],
H [auth G],
I		IPR000699RIH domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR013662RyR/IP3R Homology associated domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR016093MIR motifDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
F [auth A],
G [auth B],
H [auth G],
I		IPR003877SPRY domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR001870B30.2/SPRY domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR009460Ryanodine Receptor TM 4-6Domain
F [auth A],
G [auth B],
H [auth G],
I		IPR015925Ryanodine/Inositol 1,4,5-trisphosphate receptorFamily
F [auth A],
G [auth B],
H [auth G],
I		IPR048581Ryanodine receptor, junctional solenoid domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR035910RyR/IP3 receptor binding core, RIH domain superfamilyHomologous Superfamily
F [auth A],
G [auth B],
H [auth G],
I		IPR003032Ryanodine receptor RyrDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR035761Ryanodine receptor, SPRY domain 1Domain
F [auth A],
G [auth B],
H [auth G],
I		IPR014821Inositol 1,4,5-trisphosphate/ryanodine receptorDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR035764Ryanodine receptor, SPRY domain 2Domain
F [auth A],
G [auth B],
H [auth G],
I		IPR013333Ryanodine receptorFamily
F [auth A],
G [auth B],
H [auth G],
I		IPR043136B30.2/SPRY domain superfamilyHomologous Superfamily
F [auth A],
G [auth B],
H [auth G],
I		IPR011992EF-hand domain pairHomologous Superfamily
F [auth A],
G [auth B],
H [auth G],
I		IPR005821Ion transport domainDomain
F [auth A],
G [auth B],
H [auth G],
I		IPR035762Ryanodine receptor, SPRY domain 3Domain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth K],
C [auth D],
D [auth E],
E [auth C]		Pharos:  P0DP23

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicIon channel (VIC) superfamilyRyanodine receptor