7R6B | pdb_00007r6b

Crystal structure of mutant R43D/L124D/R125A/C273S of L-Asparaginase I from Yersinia pestis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Glutaminase/Asparaginase	8081732	3001625	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Glutaminase/Asparaginase	8081732	3001625	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	RF-1	e7r6bB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: RF-1	ECOD (v294.1)
A	RF-1	e7r6bA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: RF-1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00710	Asparaginase, N-terminal (Asparaginase)	Asparaginase, N-terminal	This is the N-terminal domain of this enzyme.	Domain
A, B	PF17763	Glutaminase/Asparaginase C-terminal domain (Asparaginase_C)	Glutaminase/Asparaginase C-terminal domain	This domain is found at the C-terminus of asparaginase enzymes.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	L-asparaginase I	asparaginase activity amidase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR027473	L-asparaginase, C-terminal	Homologous Superfamily
A, B	IPR041725	Type I (cytosolic) L-asparaginase	Family
A, B	IPR027475	Asparaginase/glutaminase, active site 2	Active Site
A, B	IPR006033	Type I L-asparaginase family	Family
A, B	IPR036152	Asparaginase/glutaminase-like superfamily	Homologous Superfamily
A, B	IPR020827	Asparaginase/glutaminase, active site 1	Active Site
A, B	IPR037152	L-asparaginase, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR040919	Asparaginase/glutaminase, C-terminal	Domain
A, B	IPR027474	L-asparaginase, N-terminal	Domain
A, B	IPR006034	Asparaginase/glutaminase-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.