7R3J
Nativ complex of PqsE and RhlR with the synthetic antagonist mBTL
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lactamase_B_1 | e7r3jA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
B | Lactamase_B_1 | e7r3jB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B_1 | ECOD (1.6) |
C | GerE | e7r3jC1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
C | Autoind_bind | e7r3jC2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
D | GerE | e7r3jD1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
D | Autoind_bind | e7r3jD2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: Autoind_bind | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | - | Domain | |
PF03472 | Autoinducer binding domain (Autoind_bind) | Autoinducer binding domain | This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ... | Domain | |
PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
IPR001279 | Metallo-beta-lactamase | Domain | |
IPR050855 | Metallo-beta-lactamase type 2-like | Family | |
IPR000792 | Transcription regulator LuxR, C-terminal | Domain | |
IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | Homologous Superfamily | |
IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | Domain |