7R3J | pdb_00007r3j

Nativ complex of PqsE and RhlR with the synthetic antagonist mBTL


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8036183 3001057 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMetallo-hydrolase/oxidoreductase 8036183 3001057 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DRibosomal_L30e7r3jD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
CRibosomal_L30e7r3jC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
ARibosomal_L30e7r3jA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)
BRibosomal_L30e7r3jB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Ribosomal_L30ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF03472Autoinducer binding domain (Autoind_bind)Autoinducer binding domainThis domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ...This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Domain
C, D
PF00196Bacterial regulatory proteins, luxR family (GerE)Bacterial regulatory proteins, luxR familyDomain
A, B
PF00753Metallo-beta-lactamase superfamily (Lactamase_B)Metallo-beta-lactamase superfamilyDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Regulatory protein RhlR
A, B
2-aminobenzoylacetyl-CoA thioesterase -