7OTC | pdb_00007otc

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth b]	SCOP2 Family	Ribosomal protein S2-like	8107461	4003744	SCOP2 (2022-06-29)
B [auth b]	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8107462	3001397	SCOP2 (2022-06-29)
G [auth g]	SCOP2 Family	Ribosomal protein S7	8107429	4001112	SCOP2 (2022-06-29)
G [auth g]	SCOP2 Superfamily	Ribosomal protein S7	8107430	3000799	SCOP2 (2022-06-29)
I [auth i]	SCOP2 Family	Translational machinery components	8107393	4000951	SCOP2 (2022-06-29)
I [auth i]	SCOP2 Superfamily	Ribosomal protein S5 domain 2-like	8107394	3000100	SCOP2 (2022-06-29)
J [auth j]	SCOP2 Family	Ribosomal protein S10	8107431	4001240	SCOP2 (2022-06-29)
J [auth j]	SCOP2 Superfamily	Ribosomal protein S10	8107432	3001336	SCOP2 (2022-06-29)
K [auth k]	SCOP2 Family	Ribosomal protein L18p and S11	8107447	4000555	SCOP2 (2022-06-29)
K [auth k]	SCOP2 Superfamily	Translational machinery components	8107448	3000571	SCOP2 (2022-06-29)
KA [auth R]	SCOP2 Family	Ribosomal protein l21p	8107417	4001630	SCOP2 (2022-06-29)
KA [auth R]	SCOP2 Superfamily	l21p-like	8107418	3002005	SCOP2 (2022-06-29)
OA [auth V]	SCOP2 Family	Ribosomal protein L25-like	8107451	4002376	SCOP2 (2022-06-29)
OA [auth V]	SCOP2 Superfamily	Ribosomal protein L25-like	8107452	3001161	SCOP2 (2022-06-29)
SA [auth Z]	SCOP2 Family	Ribosomal protein L30p/L7e	8107443	4001360	SCOP2 (2022-06-29)
SA [auth Z]	SCOP2 Superfamily	Ribosomal protein L30p/L7e	8107444	3001378	SCOP2 (2022-06-29)
UA [auth 0]	SCOP2 Family	Ribosomal protein L32p	8107457	4000508	SCOP2 (2022-06-29)
UA [auth 0]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8107458	3001320	SCOP2 (2022-06-29)
H [auth h]	SCOP2 Family	Ribosomal protein S8	8107407	4002027	SCOP2 (2022-06-29)
H [auth h]	SCOP2 Superfamily	Ribosomal protein S8	8107408	3000709	SCOP2 (2022-06-29)
F [auth f]	SCOP2 Family	Ribosomal protein S6	8107463	4001337	SCOP2 (2022-06-29)
F [auth f]	SCOP2 Superfamily	Ribosomal protein S6	8107464	3001323	SCOP2 (2022-06-29)
YA [auth 4]	SCOP2 Family	Ribosomal protein L36	8107423	4003715	SCOP2 (2022-06-29)
YA [auth 4]	SCOP2 Superfamily	Ribosomal protein L36	8107424	3001346	SCOP2 (2022-06-29)
XA [auth 3]	SCOP2 Family	Ribosomal protein L35p	8107455	4003406	SCOP2 (2022-06-29)
XA [auth 3]	SCOP2 Superfamily	L35p-like	8107456	3000790	SCOP2 (2022-06-29)
VA [auth 1]	SCOP2 Family	Ribosomal protein L33p	8107425	4000511	SCOP2 (2022-06-29)
VA [auth 1]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8107426	3001320	SCOP2 (2022-06-29)
TA [auth 5]	SCOP2 Family	Ribosomal protein L31p	8107465	4003966	SCOP2 (2022-06-29)
TA [auth 5]	SCOP2 Superfamily	L28p-like	8107466	3001966	SCOP2 (2022-06-29)
RA [auth Y]	SCOP2 Family	Ribosomal protein L29 (L29p)	8107441	4000600	SCOP2 (2022-06-29)
RA [auth Y]	SCOP2 Superfamily	Ribosomal protein L29 (L29p)	8107442	3000713	SCOP2 (2022-06-29)
QA [auth X]	SCOP2 Family	Ribosomal protein L28	8107399	4003961	SCOP2 (2022-06-29)
QA [auth X]	SCOP2 Superfamily	L28p-like	8107400	3001966	SCOP2 (2022-06-29)
PA [auth W]	SCOP2 Family	Ribosomal L27 protein	8107395	4001900	SCOP2 (2022-06-29)
PA [auth W]	SCOP2 Superfamily	Ribosomal L27 protein-like	8107396	3000539	SCOP2 (2022-06-29)
NA [auth U]	SCOP2 Family	Ribosomal proteins L24p and L21e	8107421	4001752	SCOP2 (2022-06-29)
NA [auth U]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8107422	3000334	SCOP2 (2022-06-29)
D [auth d]	SCOP2 Family	Ribosomal protein S4	8107409	4001399	SCOP2 (2022-06-29)
D [auth d]	SCOP2 Superfamily	Alpha-L RNA-binding motif	8107410	3001473	SCOP2 (2022-06-29)
LA [auth S]	SCOP2 Family	Ribosomal protein L22	8107391	4001212	SCOP2 (2022-06-29)
LA [auth S]	SCOP2 Superfamily	Ribosomal protein L22	8107392	3001078	SCOP2 (2022-06-29)
JA [auth Q]	SCOP2 Family	Ribosomal protein L20	8107459	4001930	SCOP2 (2022-06-29)
JA [auth Q]	SCOP2 Superfamily	Ribosomal protein L20	8107460	3000563	SCOP2 (2022-06-29)
IA [auth P]	SCOP2 Family	Ribosomal protein L19	8107427	4001761	SCOP2 (2022-06-29)
IA [auth P]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8107428	3000334	SCOP2 (2022-06-29)
GA [auth N]	SCOP2 Family	Prokaryotic ribosomal protein L17	8107403	4003526	SCOP2 (2022-06-29)
GA [auth N]	SCOP2 Superfamily	Prokaryotic ribosomal protein L17	8107404	3000995	SCOP2 (2022-06-29)
FA [auth M]	SCOP2 Family	Ribosomal protein L16p	8107433	4003717	SCOP2 (2022-06-29)
FA [auth M]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8107434	3000884	SCOP2 (2022-06-29)
EA [auth L]	SCOP2 Family	Ribosomal proteins L15p and L18e	8107437	4003555	SCOP2 (2022-06-29)
EA [auth L]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8107438	3001045	SCOP2 (2022-06-29)
CA [auth J]	SCOP2 Family	Ribosomal protein L13	8107411	4003623	SCOP2 (2022-06-29)
CA [auth J]	SCOP2 Superfamily	Ribosomal protein L13	8107412	3001134	SCOP2 (2022-06-29)
AA [auth F]	SCOP2 Family	Ribosomal protein L5	8107413	4001498	SCOP2 (2022-06-29)
AA [auth F]	SCOP2 Superfamily	RL5-like	8107414	3001709	SCOP2 (2022-06-29)
Z [auth E]	SCOP2 Family	Ribosomal protein L4	8107419	4003628	SCOP2 (2022-06-29)
Z [auth E]	SCOP2 Superfamily	Ribosomal protein L4	8107420	3001146	SCOP2 (2022-06-29)
Y [auth D]	SCOP2 Family	Ribosomal protein L3	8107397	4002103	SCOP2 (2022-06-29)
Y [auth D]	SCOP2 Superfamily	Translational proteins	8107398	3000811	SCOP2 (2022-06-29)
U [auth u]	SCOP2 Family	Ribosomal protein S21	8107453	4006173	SCOP2 (2022-06-29)
U [auth u]	SCOP2 Superfamily	Ribosomal protein S21	8107454	3002159	SCOP2 (2022-06-29)
S [auth s]	SCOP2 Family	Ribosomal protein S19	8107405	4001081	SCOP2 (2022-06-29)
S [auth s]	SCOP2 Superfamily	Ribosomal protein S19	8107406	3000686	SCOP2 (2022-06-29)
Q [auth q]	SCOP2 Family	Cold shock DNA-binding domain-like	8107435	4001909	SCOP2 (2022-06-29)
Q [auth q]	SCOP2 Superfamily	Nucleic acid-binding proteins	8107436	3000135	SCOP2 (2022-06-29)
P [auth p]	SCOP2 Family	Ribosomal protein S16	8107439	4001077	SCOP2 (2022-06-29)
P [auth p]	SCOP2 Superfamily	Ribosomal protein S16	8107440	3000680	SCOP2 (2022-06-29)
O [auth o]	SCOP2 Family	30S Ribosomal protein S15 / 40S Ribosomal protein S13	8107449	4000767	SCOP2 (2022-06-29)
O [auth o]	SCOP2 Superfamily	S15/NS1 RNA-binding domain	8107450	3001284	SCOP2 (2022-06-29)
N [auth n]	SCOP2 Family	Ribosomal protein S14p/S29e	8107445	4003647	SCOP2 (2022-06-29)
N [auth n]	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8107446	3000068	SCOP2 (2022-06-29)
M [auth m]	SCOP2 Family	Ribosomal protein S13	8107415	4000260	SCOP2 (2022-06-29)
M [auth m]	SCOP2 Superfamily	S13-like H2TH domain	8107416	3000053	SCOP2 (2022-06-29)
L [auth l]	SCOP2 Family	Cold shock DNA-binding domain-like	8107401	4001909	SCOP2 (2022-06-29)
L [auth l]	SCOP2 Superfamily	Nucleic acid-binding proteins	8107402	3000135	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth b]	ATP-cone	e7otcb1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
E [auth e]	ATP-cone	e7otce1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
G [auth g]	ATP-cone	e7otcg1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
I [auth i]	ATP-cone	e7otci1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
J [auth j]	ATP-cone	e7otcj1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
K [auth k]	ATP-cone	e7otck1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
R [auth r]	ATP-cone	e7otcr1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
KA [auth R]	ATP-cone	e7otcR1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
OA [auth V]	ATP-cone	e7otcV1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
SA [auth Z]	ATP-cone	e7otcZ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
UA [auth 0]	ATP-cone	e7otc01	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
ZA [auth w]	ATP-cone	e7otcw1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
H [auth h]	ATP-cone	e7otch1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
F [auth f]	ATP-cone	e7otcf1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
YA [auth 4]	ATP-cone	e7otc41	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
XA [auth 3]	ATP-cone	e7otc31	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
WA [auth 2]	ATP-cone	e7otc21	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
VA [auth 1]	ATP-cone	e7otc11	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
TA [auth 5]	ATP-cone	e7otc51	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
RA [auth Y]	ATP-cone	e7otcY1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
QA [auth X]	ATP-cone	e7otcX1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
PA [auth W]	ATP-cone	e7otcW1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
NA [auth U]	ATP-cone	e7otcU1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
D [auth d]	ATP-cone	e7otcd1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
MA [auth T]	ATP-cone	e7otcT1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
LA [auth S]	ATP-cone	e7otcS1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
JA [auth Q]	ATP-cone	e7otcQ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
IA [auth P]	ATP-cone	e7otcP1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
HA [auth O]	ATP-cone	e7otcO1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
GA [auth N]	ATP-cone	e7otcN1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
FA [auth M]	ATP-cone	e7otcM1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
EA [auth L]	ATP-cone	e7otcL1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
DA [auth K]	ATP-cone	e7otcK1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
C [auth c]	ATP-cone	e7otcc1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
CA [auth J]	ATP-cone	e7otcJ1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
BA [auth G]	ATP-cone	e7otcG1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
AA [auth F]	ATP-cone	e7otcF1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
Z [auth E]	ATP-cone	e7otcE1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
Y [auth D]	ATP-cone	e7otcD1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
X [auth C]	ATP-cone	e7otcC1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
U [auth u]	ATP-cone	e7otcu1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
T [auth t]	ATP-cone	e7otct1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
S [auth s]	ATP-cone	e7otcs1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
Q [auth q]	ATP-cone	e7otcq1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
P [auth p]	ATP-cone	e7otcp1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
O [auth o]	ATP-cone	e7otco1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
N [auth n]	ATP-cone	e7otcn1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
M [auth m]	ATP-cone	e7otcm1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)
L [auth l]	ATP-cone	e7otcl1	A: alpha bundles	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: ATP-cone	ECOD (develop294)