7OOK | pdb_00007ook

Bacteriophage PRD1 Major Capsid Protein P3 in complex with CPZ


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth C]SCOP2B SuperfamilyGroup II dsDNA viruses VP 8032458 3001214 SCOP2B (2022-06-29)
A [auth C]SCOP2B SuperfamilyGroup II dsDNA viruses VP 8032457 3001214 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup II dsDNA viruses VP 8032457 3001214 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup II dsDNA viruses VP 8032458 3001214 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyGroup II dsDNA viruses VP 8032458 3001214 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyGroup II dsDNA viruses VP 8032457 3001214 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth C]OMPdecasee7ookC1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: OMPdecaseECOD (v294.1)
BOMPdecasee7ookB1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: OMPdecaseECOD (v294.1)
C [auth A]OMPdecasee7ookA1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: OMPdecaseECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C],
B,
C [auth A]
PF25514P3 major capsid protein C-terminal (P3_C)P3 major capsid protein C-terminalThe P3 major capsid protein adopts a 'double-sandwich' structure comprising two eight-stranded viral beta-sandwich domains with jellyroll fold, each of which contains a 12-residue alpha-helix. This protein trimerises through a 'trimerisation loop' se ...The P3 major capsid protein adopts a 'double-sandwich' structure comprising two eight-stranded viral beta-sandwich domains with jellyroll fold, each of which contains a 12-residue alpha-helix. This protein trimerises through a 'trimerisation loop' sequence, and is incorporated within the viral capsid [1]. This entry represents the C-terminal domain of the P3 protein.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
B,
C [auth A]
Major capsid protein P3- -