7OOK
Bacteriophage PRD1 Major Capsid Protein P3 in complex with CPZ
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032458 | 3001214 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Group II dsDNA viruses VP | 8032457 | 3001214 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF09018 | e7ookB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
A [auth C] | PF09018 | e7ookC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
C [auth A] | PF09018 | e7ookA2 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF09018 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B, C [auth A] | PF09018 | P3 major capsid protein (Phage_Capsid_P3) | P3 major capsid protein | The P3 major capsid protein adopts a 'double-barrel' structure comprising two eight-stranded viral beta-barrels or jelly rolls, each of which contains a 12-residue alpha-helix. This protein then trimerises through a 'trimerisation loop' sequence, and ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C], B, C [auth A] | Major capsid protein P3 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B, C [auth A] | IPR029053 | Viral coat protein subunit | Homologous Superfamily |
A [auth C], B, C [auth A] | IPR016112 | Group II dsDNA virus coat/capsid protein | Homologous Superfamily |
A [auth C], B, C [auth A] | IPR015108 | Bacteriophage PRD1, P3 | Family |
A [auth C], B, C [auth A] | IPR016115 | Bacteriophage PRD1, P3, N-terminal | Homologous Superfamily |