7NEP

Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle sarcomere in the rigor state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases8082541 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases8092419 3000092 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyTropomyosin8102885 3001691 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyTropomyosin8102885 3001691 SCOP2B (2022-06-29)
N [auth T]SCOP2 FamilyTropomyosin8102884 4003866 SCOP2 (2022-06-29)
N [auth T]SCOP2 SuperfamilyTropomyosin8102885 3001691 SCOP2 (2022-06-29)
O [auth U]SCOP2B SuperfamilyTropomyosin8102885 3001691 SCOP2B (2022-06-29)
Q [auth N]SCOP2 FamilyCalmodulin-like8102866 4000924 SCOP2 (2022-06-29)
Q [auth N]SCOP2 SuperfamilyEF-hand8102867 3001983 SCOP2 (2022-06-29)
T [auth O]SCOP2B SuperfamilyEF-hand8102867 3001983 SCOP2B (2022-06-29)
RSCOP2 FamilyCalmodulin-like8102888 4000924 SCOP2 (2022-06-29)
RSCOP2 SuperfamilyEF-hand8102889 3001983 SCOP2 (2022-06-29)
U [auth S]SCOP2B SuperfamilyEF-hand8102889 3001983 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00022e7nepA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
BPF00022e7nepB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
CPF00022e7nepC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
DPF00022e7nepD2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
EPF00022e7nepE2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
FPF00022e7nepF1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
GPF00022e7nepG1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
HPF00022e7nepH2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
IPF00022e7nepI2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
JPF00022e7nepJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
KPF00022e7nepK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
L [auth P]PF00261e7nepP1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: PF00261ECOD (1.6)
M [auth Q]PF00261e7nepQ1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: PF00261ECOD (1.6)
N [auth T]PF00261e7nepT1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: PF00261ECOD (1.6)
O [auth U]PF00261e7nepU1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: PF00261ECOD (1.6)
P [auth L]PF02736e7nepL2 A: beta barrelsX: SH3H: SH3T: SH3F: PF02736ECOD (1.6)
P [auth L]PF00612e7nepL3 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: PF00612ECOD (1.6)
P [auth L]PF00063e7nepL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00063ECOD (1.6)
S [auth M]PF02736e7nepM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF02736ECOD (1.6)
S [auth M]PF00612e7nepM2 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: PF00612ECOD (1.6)
S [auth M]PF00063e7nepM3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00063ECOD (1.6)
Q [auth N]F_UNCLASSIFIEDe7nepN2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: F_UNCLASSIFIEDECOD (1.6)
T [auth O]F_UNCLASSIFIEDe7nepO2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: F_UNCLASSIFIEDECOD (1.6)
RF_UNCLASSIFIEDe7nepR1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: F_UNCLASSIFIEDECOD (1.6)
RPF13833e7nepR2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13833ECOD (1.6)
U [auth S]F_UNCLASSIFIEDe7nepS1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: F_UNCLASSIFIEDECOD (1.6)
U [auth S]PF13833e7nepS2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: PF13833ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00022Actin (Actin)Actin- Family
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
PF00261Tropomyosin (Tropomyosin)Tropomyosin- Coiled-coil
P [auth L],
S [auth M]
PF02736Myosin N-terminal SH3-like domain (Myosin_N)Myosin N-terminal SH3-like domainThis domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown.Domain
P [auth L],
S [auth M]
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)- Domain
R,
U [auth S]
PF13405EF-hand domain (EF-hand_6)EF-hand domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Actin, alpha skeletal muscle
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
Tropomyosin alpha-1 chain
P [auth L],
S [auth M]
Myosin-4
Q [auth N],
T [auth O]
Myosin light chain 1/3, skeletal muscle isoform
R,
U [auth S]
Myosin regulatory light chain 2, skeletal muscle isoform