7NEP | pdb_00007nep

Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle sarcomere in the rigor state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth P]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)
N [auth T]SCOP2 FamilyTropomyosin 8102884 4003866 SCOP2 (2022-06-29)
N [auth T]SCOP2 SuperfamilyTropomyosin 8102885 3001691 SCOP2 (2022-06-29)
O [auth U]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)
RSCOP2 FamilyCalmodulin-like 8102888 4000924 SCOP2 (2022-06-29)
RSCOP2 SuperfamilyEF-hand 8102889 3001983 SCOP2 (2022-06-29)
U [auth S]SCOP2B SuperfamilyEF-hand 8102889 3001983 SCOP2B (2022-06-29)
Q [auth N]SCOP2 FamilyCalmodulin-like 8102866 4000924 SCOP2 (2022-06-29)
Q [auth N]SCOP2 SuperfamilyEF-hand 8102867 3001983 SCOP2 (2022-06-29)
T [auth O]SCOP2B SuperfamilyEF-hand 8102867 3001983 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
L [auth P]Tropomyosine7nepP1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: TropomyosinECOD (1.6)
N [auth T]Tropomyosine7nepT1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: TropomyosinECOD (1.6)
O [auth U]Tropomyosine7nepU1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: TropomyosinECOD (1.6)
M [auth Q]Tropomyosine7nepQ1 A: alpha bundlesX: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)H: Helical domain in structural maintenance of chromosomes protein 3 (From Topology)T: Helical domain in structural maintenance of chromosomes protein 3F: TropomyosinECOD (1.6)
REF-hand_7_8e7nepR1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
REF-hand_7_4e7nepR2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_4ECOD (1.6)
U [auth S]EF-hand_7_8e7nepS1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
U [auth S]EF-hand_7_4e7nepS2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_4ECOD (1.6)
Q [auth N]EF-hand_7_8e7nepN2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
Q [auth N]EF-hand_7_5e7nepN1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
T [auth O]EF-hand_7_8e7nepO2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
T [auth O]EF-hand_7_5e7nepO1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
P [auth L]Myosin_Ne7nepL2 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_NECOD (1.6)
P [auth L]KOG0161_1ste7nepL3 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0161_1stECOD (1.6)
P [auth L]Myosin_heade7nepL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_headECOD (1.6)
S [auth M]Myosin_Ne7nepM1 A: beta barrelsX: SH3H: SH3T: SH3F: Myosin_NECOD (1.6)
S [auth M]KOG0161_1ste7nepM2 A: alpha bundlesX: Myosin VI lever arm (From Topology)H: Myosin VI lever arm (From Topology)T: Myosin VI lever armF: KOG0161_1stECOD (1.6)
S [auth M]Myosin_heade7nepM3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Myosin_headECOD (1.6)
BActin_1ste7nepB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
BActin_2nde7nepB2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
CActin_1ste7nepC2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
CActin_2nde7nepC1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
DActin_1ste7nepD2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
DActin_2nde7nepD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
EActin_1ste7nepE2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
EActin_2nde7nepE1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
GActin_1ste7nepG1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
GActin_2nde7nepG2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
IActin_1ste7nepI2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
IActin_2nde7nepI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
JActin_1ste7nepJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
JActin_2nde7nepJ2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
KActin_1ste7nepK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
KActin_2nde7nepK2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
HActin_1ste7nepH2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
HActin_2nde7nepH1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
FActin_1ste7nepF1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
FActin_2nde7nepF2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
AActin_1ste7nepA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
AActin_2nde7nepA2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
PF00261Tropomyosin (Tropomyosin)Tropomyosin- Coiled-coil
R,
U [auth S]
PF13405EF-hand domain (EF-hand_6)EF-hand domainDomain
P [auth L],
S [auth M]
PF02736Myosin N-terminal SH3-like domain (Myosin_N)Myosin N-terminal SH3-like domainThis domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. Domain
P [auth L],
S [auth M]
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain
A, B, C, D, E
PF00022Actin (Actin)Actin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
Tropomyosin alpha-1 chain
R,
U [auth S]
Myosin regulatory light chain 2, skeletal muscle isoform
Q [auth N],
T [auth O]
Myosin light chain 1/3, skeletal muscle isoform
P [auth L],
S [auth M]
Myosin-4
A, B, C, D, E
Actin, alpha skeletal muscle

InterPro: Protein Family Classification InterPro Database Homepage