7NEP | pdb_00007nep

Homology model of the in situ actomyosin complex from the A-band of mouse psoas muscle sarcomere in the rigor state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
RSCOP2 FamilyCalmodulin-like 8102888 4000924 SCOP2 (2022-06-29)
RSCOP2 SuperfamilyEF-hand 8102889 3001983 SCOP2 (2022-06-29)
U [auth S]SCOP2B SuperfamilyEF-hand 8102889 3001983 SCOP2B (2022-06-29)
Q [auth N]SCOP2 FamilyCalmodulin-like 8102866 4000924 SCOP2 (2022-06-29)
Q [auth N]SCOP2 SuperfamilyEF-hand 8102867 3001983 SCOP2 (2022-06-29)
T [auth O]SCOP2B SuperfamilyEF-hand 8102867 3001983 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)
N [auth T]SCOP2 FamilyTropomyosin 8102884 4003866 SCOP2 (2022-06-29)
N [auth T]SCOP2 SuperfamilyTropomyosin 8102885 3001691 SCOP2 (2022-06-29)
O [auth U]SCOP2B SuperfamilyTropomyosin 8102885 3001691 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_S24ee7nepA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_S24eECOD (develop294)
BOmp85e7nepB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
COmp85e7nepC1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
DOmp85e7nepD1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
EOmp85e7nepE1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
FOmp85e7nepF1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
GOmp85e7nepG1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
HOmp85e7nepH1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
IOmp85e7nepI1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
JOmp85e7nepJ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
KOmp85e7nepK1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
RRibosomal_S24ee7nepR1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_S24eECOD (develop294)
U [auth S]Omp85e7nepS1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
Q [auth N]Ribosomal_S24ee7nepN1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_S24eECOD (develop294)
T [auth O]Omp85e7nepO1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
S [auth M]Omp85e7nepM1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (develop294)
P [auth L]Ribosomal_S24ee7nepL1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_S24eECOD (develop294)
L [auth P]AAAe7nepP1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: AAAECOD (develop294)
M [auth Q]AAAe7nepQ1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: AAAECOD (develop294)
N [auth T]AAAe7nepT1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: AAAECOD (develop294)
O [auth U]AAAe7nepU1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: AAAECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00022Actin (Actin)Actin- Family
R,
U [auth S]
PF13405EF-hand domain (EF-hand_6)EF-hand domainDomain
P [auth L],
S [auth M]
PF02736Myosin N-terminal SH3-like domain (Myosin_N)Myosin N-terminal SH3-like domainThis domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. Domain
P [auth L],
S [auth M]
PF00063Myosin head (motor domain) (Myosin_head)Myosin head (motor domain)Domain
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
PF00261Tropomyosin (Tropomyosin)Tropomyosin- Coiled-coil

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Actin, alpha skeletal muscle
R,
U [auth S]
Myosin regulatory light chain 2, skeletal muscle isoform
Q [auth N],
T [auth O]
Myosin light chain 1/3, skeletal muscle isoform
P [auth L],
S [auth M]
Myosin-4
L [auth P],
M [auth Q],
N [auth T],
O [auth U]
Tropomyosin alpha-1 chain

InterPro: Protein Family Classification InterPro Database Homepage