Crystal structure of the phage VqmA-DPO complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | GerE | e7dwmB2 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
| B | PAS_4 | e7dwmB1 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS_4 | ECOD (1.6) |
| A | GerE | e7dwmA1 | A: alpha arrays | X: HTH | H: HTH | T: tetra-helical, LuxR-like | F: GerE | ECOD (1.6) |
| A | PAS_4 | e7dwmA2 | A: a+b three layers | X: Profilin-like | H: sensor domains (From Topology) | T: sensor domains | F: PAS_4 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (utative) |
| B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
| A | 3.30.450.20 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | PAS domain | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035965 | PAS domain superfamily | Homologous Superfamily | |
| IPR013656 | PAS fold 4 | Domain | |
| IPR000792 | Transcription regulator LuxR, C-terminal | Domain | |
| IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily | |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |














