7DVD
The crystal structure of p53 DNA binding domain and PUMA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | p53-like transcription factors | 8036866 | 3000758 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | p53-like transcription factors | 8036866 | 3000758 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | p53-like transcription factors | 8036866 | 3000758 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | p53-like transcription factors | 8036866 | 3000758 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | BH3 domain | 8051934 | 3002075 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | PF00870 | e7dvdC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00870 | ECOD (1.6) |
A | PF00870 | e7dvdA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00870 | ECOD (1.6) |
B | PF00870 | e7dvdB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00870 | ECOD (1.6) |
D | PF00870 | e7dvdD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00870 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00870 | P53 DNA-binding domain (P53) | P53 DNA-binding domain | This family contains one anomalous member, viz: Zea mays (Q6JAD8). This sequence is identical to human P53 and would appear to be a a human contaminant within the Zea mays sampling effort. | Domain | |
PF15826 | Bcl-2-binding component 3, p53 upregulated modulator of apoptosis (PUMA) | Bcl-2-binding component 3, p53 upregulated modulator of apoptosis | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012346 | p53/RUNT-type transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR002117 | p53 tumour suppressor family | Family | |
IPR013872 | p53 transactivation domain | Domain | |
IPR036674 | p53-like tetramerisation domain superfamily | Homologous Superfamily | |
IPR011615 | p53, DNA-binding domain | Domain | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR010991 | p53, tetramerisation domain | Domain | |
IPR040926 | Cellular tumor antigen p53, transactivation domain 2 | Domain | |
IPR031661 | Bcl-2-binding component 3 | Family |