Crystal structure of VIM1 PHD finger.
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | PHD_5 | e7dufB1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PHD_5 | ECOD (1.6) |
| A | PHD_5 | e7dufA1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PHD_5 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR015947 | PUA-like superfamily | Homologous Superfamily | |
| IPR001965 | Zinc finger, PHD-type | Domain | |
| IPR003105 | SRA-YDG | Domain | |
| IPR019787 | Zinc finger, PHD-finger | Domain | |
| IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
| IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site | |
| IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
| IPR027370 | Zinc finger, RING-type, eukaryotic | Domain | |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
| IPR047529 | E3 ubiquitin-protein ligase ORTHRUS 1-5, second RING finger, HC subclass | Domain | |
| IPR047498 | E3 ubiquitin-protein ligase ORTHRUS 1/2-like, first RING finger, HC subclass | Domain | |
| IPR045134 | UHRF1/2-like | Family | |
| IPR001841 | Zinc finger, RING-type | Domain | |
| IPR036987 | SRA-YDG superfamily | Homologous Superfamily |














