7C9R | pdb_00007c9r

STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF THIORHODOVIBRIO STRAIN 970

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth C]	d7c9rc_	All alpha proteins	Multiheme cytochromes	Multiheme cytochromes	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
B [auth L]	d7c9rl_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
D [auth H]	d7c9rh2	All beta proteins	PRC-barrel domain	PRC-barrel domain	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
D [auth H]	d7c9rh1	Membrane and cell surface proteins and peptides	Single transmembrane helix	Photosystem II reaction centre subunit H, transmembrane region	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
E [auth A]	d7c9ra_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
G [auth D]	d7c9rd_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
I [auth F]	d7c9rf_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
K [auth I]	d7c9ri_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
M [auth K]	d7c9rk_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
O	d7c9ro_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
DA [auth 4]	d7c9r4_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
F [auth B]	d7c9rb_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
P	d7c9rp_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
FA [auth 6]	d7c9r6_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
H [auth E]	d7c9re_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
HA [auth 8]	d7c9r8_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
J [auth G]	d7c9rg_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
JA [auth 0]	d7c9r0_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
N	d7c9rn_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
R	d7c9rr_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
T	d7c9rt_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
V	d7c9rv_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
Z	d7c9rz_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
X	d7c9rx_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
L [auth J]	d7c9rj_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
BA [auth 2]	d7c9r2_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
AA [auth 1]	d7c9r1_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
CA [auth 3]	d7c9r3_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
EA [auth 5]	d7c9r5_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
GA [auth 7]	d7c9r7_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
S	d7c9rs_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
U	d7c9ru_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
W	d7c9rw_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
Y	d7c9ry_	Membrane and cell surface proteins and peptides	Light-harvesting complex subunits	Light-harvesting complex subunits	automated matches	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)
C [auth M]	d7c9rm_	Membrane and cell surface proteins and peptides	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	Bacterial photosystem II reaction centre, L and M subunits	automated matches	(Thiorhodovibrio frisius ) [TaxId: 631362 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth L]	SCOP2 Family	Bacterial photosystem II reaction centre, L and M subunits	8097807	4002035	SCOP2 (2022-06-29)
B [auth L]	SCOP2 Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8097808	3000736	SCOP2 (2022-06-29)
D [auth H]	SCOP2 Family	Photosynthetic reaction centre, H-chain, cytoplasmic domain	8097901	4001979	SCOP2 (2022-06-29)
D [auth H]	SCOP2 Family	Photosystem II reaction centre subunit H, transmembrane region	8100951	4002050	SCOP2 (2022-06-29)
D [auth H]	SCOP2 Superfamily	PRC-barrel domain	8097902	3000637	SCOP2 (2022-06-29)
D [auth H]	SCOP2 Superfamily	Photosystem II reaction centre subunit H, transmembrane region	8100952	3000750	SCOP2 (2022-06-29)
DA [auth 4]	SCOP2 Family	Light-harvesting complex subunits	8097811	4003043	SCOP2 (2022-06-29)
DA [auth 4]	SCOP2 Superfamily	Light-harvesting complex subunits	8097812	3000199	SCOP2 (2022-06-29)
F [auth B]	SCOP2B Superfamily	Light-harvesting complex subunits	8097812	3000199	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Light-harvesting complex subunits	8097812	3000199	SCOP2B (2022-06-29)
FA [auth 6]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
H [auth E]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
HA [auth 8]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
J [auth G]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
JA [auth 0]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
R	SCOP2 Family	Light-harvesting complex subunits	8097805	4003043	SCOP2 (2022-06-29)
R	SCOP2 Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2 (2022-06-29)
T	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
L [auth J]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
BA [auth 2]	SCOP2B Superfamily	Light-harvesting complex subunits	8097806	3000199	SCOP2B (2022-06-29)
C [auth M]	SCOP2 Family	Bacterial photosystem II reaction centre, L and M subunits	8097809	4002035	SCOP2 (2022-06-29)
C [auth M]	SCOP2 Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8097810	3000736	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth C]	Ldh_1_C	e7c9rC1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
B [auth L]	Ldh_1_C	e7c9rL1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
D [auth H]	Ldh_1_C	e7c9rH1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
E [auth A]	Ldh_1_C	e7c9rA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
G [auth D]	Ldh_1_C	e7c9rD1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
I [auth F]	Ldh_1_C	e7c9rF1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
K [auth I]	Ldh_1_C	e7c9rI1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
M [auth K]	Ldh_1_C	e7c9rK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
O	Ldh_1_C	e7c9rO1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
DA [auth 4]	Ldh_1_C	e7c9r41	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
F [auth B]	Ldh_1_C	e7c9rB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
P	Ldh_1_C	e7c9rP1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
FA [auth 6]	Ldh_1_C	e7c9r61	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
H [auth E]	Ldh_1_C	e7c9rE1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
HA [auth 8]	Ldh_1_C	e7c9r81	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
J [auth G]	Ldh_1_C	e7c9rG1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
JA [auth 0]	Ldh_1_C	e7c9r01	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
N	Ldh_1_C	e7c9rN1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
R	Ldh_1_C	e7c9rR1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
T	Ldh_1_C	e7c9rT1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
V	Ldh_1_C	e7c9rV1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
Z	Ldh_1_C	e7c9rZ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
X	Ldh_1_C	e7c9rX1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
L [auth J]	Ldh_1_C	e7c9rJ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
BA [auth 2]	Ldh_1_C	e7c9r21	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
Q	PA14	e7c9rQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PA14	ECOD (v294.1)
AA [auth 1]	Ldh_1_C	e7c9r11	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
CA [auth 3]	Ldh_1_C	e7c9r31	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
EA [auth 5]	Ldh_1_C	e7c9r51	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
GA [auth 7]	Ldh_1_C	e7c9r71	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
S	Ldh_1_C	e7c9rS1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
U	Ldh_1_C	e7c9rU1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
W	Ldh_1_C	e7c9rW1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
Y	Ldh_1_C	e7c9rY1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
IA [auth 9]	PA14	e7c9r91	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PA14	ECOD (v294.1)
C [auth M]	Ldh_1_C	e7c9rM1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D [auth H]	3.90.50.10	Alpha Beta	Alpha-Beta Complex	Photosynthetic Reaction Center	Chain H, domain 2	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C]	PF02276	Photosynthetic reaction centre cytochrome C subunit (CytoC_RC)	Photosynthetic reaction centre cytochrome C subunit	-	Family
B [auth L]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
D [auth H]	PF03967	Photosynthetic reaction centre, H-chain N-terminal region (PRCH)	Photosynthetic reaction centre, H-chain N-terminal region	-	Family
D [auth H]	PF05239	PRC-barrel domain (PRC)	PRC-barrel domain	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...	The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].	Domain
E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], O	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
DA [auth 4], F [auth B], P	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
Q	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, U, W, Y	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
IA [auth 9]	PF00556	Antenna complex alpha/beta subunit (LHC)	Antenna complex alpha/beta subunit		Domain
C [auth M]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	Photosynthetic reaction center cytochrome c subunit	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle
B [auth L]	L subunit of the reaction center	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure endomembrane system membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm cellular anatomical structure endomembrane system membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
D [auth H]	Photosynthetic reaction center, subunit H, bacterial	-	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle
E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], O	Alpha subunit 1 of light-harvesting 1 complex	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
DA [auth 4], F [auth B], P	Antenna complex alpha/beta subunit	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	Antenna complex alpha/beta subunit	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
Q	Antenna complex alpha/beta subunit	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, U, W, Y	LHC domain-containing protein	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
IA [auth 9]	Alpha subunit 2 of light-harvesting 1 complex	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
C [auth M]	Reaction center protein M chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	cellular anatomical structure endomembrane system intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle cellular anatomical structure endomembrane system intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane intracellular membraneless organelle plasma membrane-derived chromatophore intracellular organelle organelle membraneless organelle cytoplasm photosynthetic membrane thylakoid membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular vesicle light-harvesting complex intracellular membrane-bounded organelle cytoplasmic vesicle vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C]	IPR036280	Multiheme cytochrome superfamily	Homologous Superfamily
A [auth C]	IPR023119	Multihaem cytochrome, PRC subunit superfamily	Homologous Superfamily
A [auth C]	IPR003158	Photosynthetic reaction centre, cytochrome c subunit	Family
B [auth L]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
B [auth L]	IPR000484	Photosynthetic reaction centre, L/M	Family
B [auth L]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
B [auth L]	IPR005871	Photosynthetic reaction centre, L subunit	Family
D [auth H]	IPR014747	Bacterial photosynthetic reaction centre, H-chain, C-terminal	Homologous Superfamily
D [auth H]	IPR015810	Photosynthetic reaction centre, H subunit, N-terminal	Domain
D [auth H]	IPR005652	Photosynthetic reaction centre, H subunit	Family
D [auth H]	IPR037097	Photosynthetic reaction centre, H subunit, N-terminal domain superfamily	Homologous Superfamily
D [auth H]	IPR011033	PRC-barrel-like superfamily	Homologous Superfamily
D [auth H]	IPR027275	PRC-barrel domain	Domain
E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], O	IPR000066	Antenna complex, alpha/beta subunit	Domain
E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], O	IPR018332	Antenna complex, alpha subunit	Family
E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], E [auth A], G [auth D], I [auth F], K [auth I], M [auth K], O	IPR035889	Light-harvesting complex	Homologous Superfamily
DA [auth 4], F [auth B], P	IPR000066	Antenna complex, alpha/beta subunit	Domain
DA [auth 4], F [auth B], P	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
DA [auth 4], F [auth B], P	IPR035889	Light-harvesting complex	Homologous Superfamily
DA [auth 4], F [auth B], P	IPR002362	Light-harvesting protein B beta chain	Family
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	IPR000066	Antenna complex, alpha/beta subunit	Domain
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	IPR035889	Light-harvesting complex	Homologous Superfamily
BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], BA [auth 2], FA [auth 6], H [auth E], HA [auth 8], J [auth G], JA [auth 0], L [auth J], N, R, T, V, X, Z	IPR002362	Light-harvesting protein B beta chain	Family
Q	IPR000066	Antenna complex, alpha/beta subunit	Domain
Q	IPR018332	Antenna complex, alpha subunit	Family
Q	IPR035889	Light-harvesting complex	Homologous Superfamily
AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, U, W, Y	IPR000066	Antenna complex, alpha/beta subunit	Domain
AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, U, W, Y	IPR018332	Antenna complex, alpha subunit	Family
AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, AA [auth 1], CA [auth 3], EA [auth 5], GA [auth 7], S, U, W, Y	IPR035889	Light-harvesting complex	Homologous Superfamily
IA [auth 9]	IPR000066	Antenna complex, alpha/beta subunit	Domain
IA [auth 9]	IPR018332	Antenna complex, alpha subunit	Family
IA [auth 9]	IPR035889	Light-harvesting complex	Homologous Superfamily
C [auth M]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
C [auth M]	IPR005781	Photosynthetic reaction centre, M subunit	Family
C [auth M]	IPR000484	Photosynthetic reaction centre, L/M	Family
C [auth M]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth C], AA [auth 1], B [auth L], BA [auth 2], C [auth M] A [auth C], AA [auth 1], B [auth L], BA [auth 2], C [auth M], CA [auth 3], D [auth H], DA [auth 4], E [auth A], EA [auth 5], F [auth B], FA [auth 6], G [auth D], GA [auth 7], H [auth E], HA [auth 8], I [auth F], IA [auth 9], J [auth G], JA [auth 0], K [auth I], L [auth J], M [auth K], N, O, P, Q, R, S, T, U, V, W, X, Y, Z	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Bacterial photosystems

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth C], AA [auth 1], B [auth L], BA [auth 2], C [auth M] A [auth C], AA [auth 1], B [auth L], BA [auth 2], C [auth M], CA [auth 3], D [auth H], DA [auth 4], E [auth A], EA [auth 5], F [auth B], FA [auth 6], G [auth D], GA [auth 7], H [auth E], HA [auth 8], I [auth F], IA [auth 9], J [auth G], JA [auth 0], K [auth I], L [auth J], M [auth K], N, O, P, Q, R, S, T, U, V, W, X, Y, Z	PDBTM	Annotated as membrane protein by PDBTM