7ASE
43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
V [auth F] | SCOP2 Family | Ribosomal protein S2-like | 8102902 | 4003744 | SCOP2 (2021-05-27) |
V [auth F] | SCOP2 Superfamily | SIS domain/Ribosomal protein S2-like | 8102903 | 3001397 | SCOP2 (2021-05-27) |
HA [auth O] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8099472 | 3000034 | SCOP2B (2021-05-27) |
J [auth u] | SCOP2B Superfamily | S13-like H2TH domain | 8101629 | 3000053 | SCOP2B (2021-05-27) |
M [auth o] | SCOP2B Superfamily | Ribosomal protein S7 | 8066023 | 3000799 | SCOP2B (2021-05-27) |
Q [auth t] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8059226 | 3000068 | SCOP2B (2021-05-27) |
R [auth U] | SCOP2 Family | Cold shock DNA-binding domain-like | 8102772 | 4001909 | SCOP2 (2021-05-27) |
R [auth U] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8102773 | 3000135 | SCOP2 (2021-05-27) |
S [auth v] | SCOP2B Superfamily | Translational machinery components | 8099464 | 3000571 | SCOP2B (2021-05-27) |
X [auth g] | SCOP2 Family | Ribosomal protein S21e | 8102792 | 4006215 | SCOP2 (2021-05-27) |
X [auth g] | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8102793 | 3000068 | SCOP2 (2021-05-27) |
Y [auth a] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8099474 | 3000034 | SCOP2B (2021-05-27) |
AA [auth h] | SCOP2B Superfamily | L30e-like | 8099460 | 3001739 | SCOP2B (2021-05-27) |
EA [auth L] | SCOP2B Superfamily | Ribosomal protein S10 | 8099462 | 3001336 | SCOP2B (2021-05-27) |
GA [auth N] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8099478 | 3000034 | SCOP2B (2021-05-27) |
IA [auth b] | SCOP2 Family | Ribosomal protein S8 | 8102906 | 4002027 | SCOP2 (2021-05-27) |
IA [auth b] | SCOP2 Superfamily | Ribosomal protein S8 | 8102907 | 3000709 | SCOP2 (2021-05-27) |
JA [auth c] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8099466 | 3002190 | SCOP2B (2021-05-27) |
OA [auth Q] | SCOP2 Family | Ribosomal protein S14p/S29e | 8102904 | 4003647 | SCOP2 (2021-05-27) |
OA [auth Q] | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8102905 | 3000068 | SCOP2 (2021-05-27) |
VA [auth W] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8059222 | 3002166 | SCOP2B (2021-05-27) |
H [auth p] | SCOP2B Superfamily | WD40 repeat-like | 8101627 | 3001694 | SCOP2B (2021-05-27) |
I [auth r] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8099470 | 3000100 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth j] | PF01599 | e7asej1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01599 | ECOD (1.6) |
O [auth R] | PF08069 | e7aseR1 | A: alpha arrays | X: HTH | H: 40S ribosomal protein S13 N-terminal domain (From Topology) | T: 40S ribosomal protein S13 N-terminal domain | F: PF08069 | ECOD (1.6) |
O [auth R] | PF00312 | e7aseR2 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
V [auth F] | PF00318 | e7aseF1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
Z [auth J] | F_UNCLASSIFIED | e7aseJ1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: F_UNCLASSIFIED | ECOD (1.6) |
Z [auth J] | PF00076 | e7aseJ3 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: PF00076 | ECOD (1.6) |
CA [auth P] | PF01092 | e7aseP1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: PF01092 | ECOD (1.6) |
FA [auth M] | PF00189 | e7aseM2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
FA [auth M] | PF07650 | e7aseM1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
HA [auth O] | PF01090 | e7aseO1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01090 | ECOD (1.6) |
J [auth u] | PF00416 | e7aseu1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
K [auth m] | PF00164 | e7asem1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
L [auth Z] | PF01201 | e7aseZ1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF01201 | ECOD (1.6) |
M [auth o] | PF00177 | e7aseo1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
N [auth q] | PF01251 | e7aseq1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: 40S ribosomal protein S7-A (From Topology) | T: 40S ribosomal protein S7-A | F: PF01251 | ECOD (1.6) |
P [auth S] | PF01667 | e7aseS1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01667 | ECOD (1.6) |
Q [auth t] | PF01283 | e7aset1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF01283 | ECOD (1.6) |
R [auth U] | PF01200 | e7aseU1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF01200 | ECOD (1.6) |
S [auth v] | PF00411 | e7asev1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
T [auth X] | PF00366,PF16205 | e7aseX1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366,PF16205 | ECOD (1.6) |
U [auth B] | PF00163,PF01479 | e7aseB1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
W [auth d] | PF03719 | e7ased3 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
W [auth d] | PF00333 | e7ased2 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
W [auth d] | PF00333 | e7ased1 | A: extended segments | X: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology) | H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology) | T: N-terminal region in 40S ribosomal protein rpS2 (S5p) | F: PF00333 | ECOD (1.6) |
X [auth g] | PF01249 | e7aseg1 | A: a+b two layers | X: 40S ribosomal protein rpS21 (S21e) (From Topology) | H: 40S ribosomal protein rpS21 (S21e) (From Topology) | T: 40S ribosomal protein rpS21 (S21e) | F: PF01249 | ECOD (1.6) |
Y [auth a] | PF03297 | e7asea1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF03297 | ECOD (1.6) |
AA [auth h] | PF01248 | e7aseh1 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: PF01248 | ECOD (1.6) |
BA [auth 5] | F_UNCLASSIFIED | e7ase53 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: F_UNCLASSIFIED | ECOD (1.6) |
BA [auth 5] | PF09173 | e7ase54 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: PF09173 | ECOD (1.6) |
BA [auth 5] | PF00009 | e7ase52 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
BA [auth 5] | F_UNCLASSIFIED | e7ase51 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: F_UNCLASSIFIED | ECOD (1.6) |
DA [auth i] | PF00833 | e7asei1 | A: alpha arrays | X: HTH | H: HTH | T: FF domain | F: PF00833 | ECOD (1.6) |
EA [auth L] | PF00338 | e7aseL1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
GA [auth N] | PF03501 | e7aseN1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF03501 | ECOD (1.6) |
IA [auth b] | PF00410 | e7aseb2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
IA [auth b] | PF00410 | e7aseb1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
JA [auth c] | PF04758 | e7asec1 | A: extended segments | X: 40S ribosomal protein S30 (S30e) (From Topology) | H: 40S ribosomal protein S30 (S30e) (From Topology) | T: 40S ribosomal protein S30 (S30e) | F: PF04758 | ECOD (1.6) |
KA [auth V] | PF01253 | e7aseV1 | A: a+b two layers | X: Glucose permease domain IIB-like | H: eIF1-like (From Topology) | T: eIF1-like | F: PF01253 | ECOD (1.6) |
MA [auth E] | PF01399 | e7aseE2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
MA [auth E] | F_UNCLASSIFIED | e7aseE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth y] | PF01282 | e7asey1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF01282 | ECOD (1.6) |
NA [auth Y] | F_UNCLASSIFIED | e7aseY1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
OA [auth Q] | PF00253 | e7aseQ1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
PA [auth D] | PF05162 | e7aseD1 | A: extended segments | X: Ribosomal protein L41-A (From Topology) | H: Ribosomal protein L41-A (From Topology) | T: Ribosomal protein L41-A | F: PF05162 | ECOD (1.6) |
QA [auth G] | PF01398 | e7aseG1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
QA [auth G] | F_UNCLASSIFIED | e7aseG2 | A: extended segments | X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
RA [auth K] | F_UNCLASSIFIED | e7aseK1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: F_UNCLASSIFIED | ECOD (1.6) |
RA [auth K] | PF10075 | e7aseK2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF10075 | ECOD (1.6) |
SA [auth T] | PF00203 | e7aseT1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
VA [auth W] | PF01015 | e7aseW2 | A: beta barrels | X: Ribosomal protein L25-like | H: 40S ribosomal protein S3A N-terminal domain (From Topology) | T: 40S ribosomal protein S3A N-terminal domain | F: PF01015 | ECOD (1.6) |
VA [auth W] | PF01015 | e7aseW1 | A: a+b two layers | X: T-fold | H: 40S ribosomal protein S3A C-terminal domain (From Topology) | T: 40S ribosomal protein S3A C-terminal domain | F: PF01015 | ECOD (1.6) |
E [auth s] | PF00575 | e7ases3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00575 | ECOD (1.6) |
E [auth s] | F_UNCLASSIFIED | e7ases1 | A: alpha arrays | X: HhH/H2TH | H: eIF2alpha middle domain (From Topology) | T: eIF2alpha middle domain | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth s] | PF07541 | e7ases2 | A: a+b two layers | X: Alpha-beta plaits | H: eIF-2-alpha, C-terminal domain (From Topology) | T: eIF-2-alpha, C-terminal domain | F: PF07541 | ECOD (1.6) |
XA [auth H] | F_UNCLASSIFIED | e7aseH1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: F_UNCLASSIFIED | ECOD (1.6) |
ZA [auth l] | PF00900 | e7asel3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00900 | ECOD (1.6) |
ZA [auth l] | PF00467,PF16121 | e7asel2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00467,PF16121 | ECOD (1.6) |
ZA [auth l] | PF01479,PF08071 | e7asel1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF01479,PF08071 | ECOD (1.6) |
H [auth p] | PF00400 | e7asep1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
I [auth r] | PF00380 | e7aser1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
O [auth R] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
O [auth R] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | - | Domain |
V [auth F] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
V [auth F] | PF23002 | ATP-dependent RNA helicase DDX60, PIN-like domain (PIN-like_DDX60) | ATP-dependent RNA helicase DDX60, PIN-like domain | This domain is found N-terminal in the homologues of ATP-dependent RNA helicase DDX60 (also known as DEAD-box RNA helicase). This helicase binds ssRNA, dsRNA and dsDNA and can promote the binding of RIGI to dsRNA. DDX60 is non-essential in mammals [1 ... | Domain |
Z [auth J] | PF00076 | RNA recognition motif (RRM_1) | RNA recognition motif | The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ... | Domain |
Z [auth J] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
CA [auth P] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
CA [auth P] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
FA [auth M] | PF07650 | KH domain (KH_2) | KH domain | - | Domain |
FA [auth M] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | - | Family |
FA [auth M] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
HA [auth O] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
HA [auth O] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
L [auth Z] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
P [auth S] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
R [auth U] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | - | Family |
T [auth X] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | - | Domain |
T [auth X] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
U [auth B] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
U [auth B] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | - | Domain |
U [auth B] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
BA [auth 5] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
BA [auth 5] | PF09173 | Initiation factor eIF2 gamma, C terminal (eIF2_C) | Initiation factor eIF2 gamma, C terminal | Members of this family, which are found in the initiation factors eIF2 and EF-Tu, adopt a structure consisting of a beta barrel with Greek key topology. They are required for formation of the ternary complex with GTP and initiator tRNA [1]. | Domain |
EA [auth L] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
EA [auth L] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
EA [auth L] | PF08071 | RS4NT (NUC023) domain (RS4NT) | RS4NT (NUC023) domain | This is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. | Domain |
EA [auth L] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
KA [auth V] | PF01253 | Translation initiation factor SUI1 (SUI1) | Translation initiation factor SUI1 | - | Domain |
KA [auth V] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
MA [auth E] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
NA [auth Y] | PF01282 | Ribosomal protein S24e (Ribosomal_S24e) | Ribosomal protein S24e | - | Family |
OA [auth Q] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
OA [auth Q] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
PA [auth D] | PF05162 | Ribosomal protein L41 (Ribosomal_L41) | Ribosomal protein L41 | - | Family |
QA [auth G] | PF01249 | Ribosomal protein S21e (Ribosomal_S21e) | Ribosomal protein S21e | - | Family |
RA [auth K] | PF10075 | CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K) | CSN8/PSMD8/EIF3K family | - | Family |
SA [auth T] | PF01283 | Ribosomal protein S26e (Ribosomal_S26e) | Ribosomal protein S26e | - | Family |
SA [auth T] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | - | Domain |
TA [auth C] | PF05470 | Eukaryotic translation initiation factor 3 subunit 8 N-terminus (eIF-3c_N) | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | - | Repeat |
VA [auth W] | PF01176 | Translation initiation factor 1A / IF-1 (eIF-1a) | Translation initiation factor 1A / IF-1 | This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1. | Domain |
XA [auth H] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
YA [auth A] | PF05091 | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (eIF-3_zeta) | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | - | Family |